Aan_R000637 (Calypte anna)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 Aan_R000637 T325246_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFIA
M03480_2.00 		Homo sapiens
YTGGCANNNTGCCAA
TTGGCANNNTGCCAR		 SELEX
Jolma et al.(2013)
NFIA_1 		0.989 0.989
NFIA
M03481_2.00 		Homo sapiens
NNTGCCAANN
NNTTGGCANN		 SELEX
Jolma et al.(2013)
NFIA_2 		0.989 0.989
NFIA
M09379_2.00 		Homo sapiens
YTGGCWNYNDGCCAD
HTGGCHNRNWGCCAR		 Misc
Kulakovskiy et al.(2013)
NFIA_HUMAN.H11MO.0.C 		0.989 0.989
Nfia
M09383_2.00 		Mus musculus
YTGGCWNYNDGCCAD
HTGGCHNRNWGCCAR		 Misc
Kulakovskiy et al.(2013)
NFIA_MOUSE.H11MO.0.C 		0.989 0.989
NFIA
M11282_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1A_Q6_01 		0.989 0.989
Nfia
M11291_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFIA_02 		0.989 0.989
NFIX
M03475_2.00 		Homo sapiens
YTGGCNNNNTGCCAA
TTGGCANNNNGCCAR		 SELEX
Jolma et al.(2013)
NFIX_1 		0.945 0.945
NFIX
M03476_2.00 		Homo sapiens
NYTGGCDNN
NNHGCCARN		 SELEX
Jolma et al.(2013)
NFIX_2 		0.945 0.945
NFIX
M03477_2.00 		Homo sapiens
NYTGGCWNN
NNWGCCARN		 SELEX
Jolma et al.(2013)
NFIX_3 		0.945 0.945
NFIX
M03478_2.00 		Homo sapiens
TTGGCANNNTGCCAR
YTGGCANNNTGCCAA		 SELEX
Jolma et al.(2013)
NFIX_4 		0.945 0.945
NFIX
M05741_2.00 		Homo sapiens
NHTGGCDNNNTGCCADN
NHTGGCANNNHGCCADN		 SELEX
Yin et al.(2017)
NFIX_FL_HT-SELEX 		0.945 0.945
NFIX
M05742_2.00 		Homo sapiens
NYTGGCDNNNTGCCARN
NYTGGCANNNHGCCARN		 SELEX
Yin et al.(2017)
NFIX_FL_Methyl-HT-SELEX 		0.945 0.945
NFIB
M03479_2.00 		Homo sapiens
YTGGCANNNTGCCAA
TTGGCANNNTGCCAR		 SELEX
Jolma et al.(2013)
NFIB_1 		0.923 0.923
NFIB
M05747_2.00 		Homo sapiens
NYTGGCNNNNYGCCARN
NYTGGCRNNNNGCCARN		 SELEX
Yin et al.(2017)
NFIB_FL_HT-SELEX 		0.923 0.923
Nfib
M09381_2.00 		Mus musculus
BVWGCCARV
BYTGGCWBV		 Misc
Kulakovskiy et al.(2013)
NFIB_MOUSE.H11MO.0.C 		0.923 0.923
NFIB
M11280_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1B_Q6_01 		0.923 0.923
NFIB
M11281_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1B_Q6 		0.923 0.923
NFIB
M05748_2.00 		Homo sapiens
NTTGGCDNNNTGCCARN
NYTGGCANNNHGCCAAN		 SELEX
Yin et al.(2017)
NFIB_FL_Methyl-HT-SELEX 		0.923 0.923
Nfic
M09385_2.00 		Mus musculus
NBYTGGCWN
NWGCCARVN		 Misc
Kulakovskiy et al.(2013)
NFIC_MOUSE.H11MO.0.A 		0.868 0.868
NFIC
M05745_2.00 		Homo sapiens
NTTGGCNNNNTGCCARN
NYTGGCANNNNGCCAAN		 SELEX
Yin et al.(2017)
NFIC_FL_HT-SELEX 		0.857 0.857
NFIC
M08164_2.00 		Homo sapiens
NNCTTGGCANN
NNTGCCAAGNN		 ChIP-seq
Mathelier et al.(2014)
MA0161.2 		0.857 0.857
NFIC
M09378_2.00 		Homo sapiens
BYTGGMHBYNDKCCMRV
BYKGGMHNRVDKCCARV		 Misc
Kulakovskiy et al.(2013)
NFIC_HUMAN.H11MO.0.A 		0.857 0.857
NFIC
M09635_2.00 		Homo sapiens
BYTGSCAV
BTGSCARV		 Misc
Heinz et al.(2010)
LNCaP-NF1_Unpublished 		0.857 0.857
NFIC
M09636_2.00 		Homo sapiens
BYTGGCHNNNDGCCAR
YTGGCHNNNDGCCARV		 Misc
Heinz et al.(2010)
LNCAP-NF1_Unpublished 		0.857 0.857
NFIC
M11278_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CTF1_01 		0.857 0.857
NFIC
M11279_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1C_Q6 		0.857 0.857
NFIC
M05746_2.00 		Homo sapiens
NYTGGCNNNNYGCCARN
NYTGGCRNNNNGCCARN		 SELEX
Yin et al.(2017)
NFIC_FL_Methyl-HT-SELEX 		0.857 0.857
NfI
M03968_2.00 		Drosophila melanogaster
YTGGCDNNNHGCCAR
YTGGCDNNNHGCCAR		 SELEX
Nitta et al.(2015)
NfI_1 		0.780 0.780
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aan_R000637 SMAD 62 166

Links

Other SMAD family TFs
Other Calypte anna TFs

363 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29686.m000890 Ricinus communis 29686.m000890 I
29823.m000215 Ricinus communis 29823.m000215 I
AC217264.3_FG005 Zea mays AC217264.3_FG005 I
AMTR_s00037p00177500 Amborella trichopoda AMTR_s00037p00177500 I
AMTR_s00038p00150140 Amborella trichopoda AMTR_s00038p00150140 I
AMTR_s00068p00099460 Amborella trichopoda AMTR_s00068p00099460 I
Aquca_005_00025 Aquilegia coerulea Aquca_005_00025 I
ATMYB120 Arabidopsis thaliana AT5G55020 I
BGIOSGA020673 Oryza indica BGIOSGA020673 I
Bo3g021790 Brassica oleracea Bo3g021790 I
Bo9g119060 Brassica oleracea Bo9g119060 I
Bostr.13129s0364 Boechera stricta Bostr.13129s0364 I
Bostr.26833s0761 Boechera stricta Bostr.26833s0761 I
Bra002938 Brassica rapa Bra002938 I
Bra028997 Brassica rapa Bra028997 I
BRADI2G53010 Brachypodium distachyon BRADI2G53010 I
Cagra.1629s0073 Capsella grandiflora Cagra.1629s0073 I
Cagra.2117s0052 Capsella grandiflora Cagra.2117s0052 I
Carubv10000715m.g Capsella rubella Carubv10000715m.g I
Carubv10026070m.g Capsella rubella Carubv10026070m.g I
cassava11031.m1 Manihot esculenta cassava11031.m1 I
cassava1461.valid.m1 Manihot esculenta cassava1461.valid.m1 I
cassava30977.valid.m1 Manihot esculenta cassava30977.valid.m1 I
cassava40302.m1 Manihot esculenta cassava40302.m1 I
cassava44767.m1 Manihot esculenta cassava44767.m1 I
Ca_20081 Cicer arietinum Ca_20081 I
Ca_25013 Cicer arietinum Ca_25013 I
chr3.CM0005.370.nc Lotus japonicus chr3.CM0005.370.nc I
Ciclev10010620m.g Citrus clementina Ciclev10010620m.g I
Cla005406 Citrullus lanatus Cla005406 I
Cla013880 Citrullus lanatus Cla013880 I
Cucsa.060080 Cucumis sativus Cucsa.060080 I
Cucsa.364400 Cucumis sativus Cucsa.364400 I
Eucgr.A01122 Eucalyptus grandis Eucgr.A01122 I
Eucgr.A02110 Eucalyptus grandis Eucgr.A02110 I
Eucgr.G03183 Eucalyptus grandis Eucgr.G03183 I
evm.TU.supercontig_12.292 Carica papaya evm.TU.supercontig_12.292 I
evm.TU.supercontig_33.151 Carica papaya evm.TU.supercontig_33.151 I
e_gw1.6.239.1 Physcomitrella patens e_gw1.6.239.1 I
F775_00954 Aegilops tauschii F775_00954 I
F775_08967 Aegilops tauschii F775_08967 I
F775_14392 Aegilops tauschii F775_14392 I
F775_23034 Aegilops tauschii F775_23034 I
F775_28392 Aegilops tauschii F775_28392 I
GAM1 Oryza indica BGIOSGA004670 I
Gam1 Hordeum vulgare Q96464_HORVU D
GAM1_ORYSI Oryza sativa GAM1_ORYSI D
GAMYB Oryza sativa OS01G0812000 I
gene00431-v1.0-hybrid Fragaria vesca gene00431-v1.0-hybrid I
gene03321-v1.0-hybrid Fragaria vesca gene03321-v1.0-hybrid I
gene03323-v1.0-hybrid Fragaria vesca gene03323-v1.0-hybrid I
GLYMA08G42920 Glycine max GLYMA08G42920 I
GLYMA08G42955 Glycine max GLYMA08G42955 I
GLYMA13G25716 Glycine max GLYMA13G25716 I
Gorai.002G089900 Gossypium raimondii Gorai.002G089900 I
Gorai.006G121900 Gossypium raimondii Gorai.006G121900 I
Gorai.007G312700 Gossypium raimondii Gorai.007G312700 I
Gorai.009G301100 Gossypium raimondii Gorai.009G301100 I
Gorai.010G212500 Gossypium raimondii Gorai.010G212500 I
Gorai.012G022000 Gossypium raimondii Gorai.012G022000 I
Gorai.013G159200 Gossypium raimondii Gorai.013G159200 I
GRMZM2G070523 Zea mays GRMZM2G070523 I
GRMZM2G139688 Zea mays GRMZM2G139688 I
GRMZM2G161512 Zea mays GRMZM2G161512 N
GRMZM2G343068 Zea mays GRMZM2G343068 N
GSMUA_Achr10G14030_001 Musa acuminata GSMUA_Achr10G14030_001 I
GSMUA_Achr1G17150_001 Musa acuminata GSMUA_Achr1G17150_001 I
GSMUA_Achr4G23690_001 Musa acuminata GSMUA_Achr4G23690_001 I
GSMUA_Achr5G06530_001 Musa acuminata GSMUA_Achr5G06530_001 I
GSMUA_Achr6G14840_001 Musa acuminata GSMUA_Achr6G14840_001 I
GSMUA_Achr7G00280_001 Musa acuminata GSMUA_Achr7G00280_001 I
GSMUA_Achr7G13700_001 Musa acuminata GSMUA_Achr7G13700_001 I
gw1.238.44.1 Physcomitrella patens gw1.238.44.1 I
gw1.66.160.1 Physcomitrella patens gw1.66.160.1 I
LjSGA_057622.2 Lotus japonicus LjSGA_057622.2 I
LjT02G13.10.nc Lotus japonicus LjT02G13.10.nc I
LPERR03G20110 Leersia perrieri LPERR03G20110 I
LPERR06G20610 Leersia perrieri LPERR06G20610 I
Lus10008685.g Linum usitatissimum Lus10008685.g I
Lus10021539.g Linum usitatissimum Lus10021539.g I
Lus10026142.g Linum usitatissimum Lus10026142.g I
Lus10026787.g Linum usitatissimum Lus10026787.g I
Lus10027189.g Linum usitatissimum Lus10027189.g I
Lus10035275.g Linum usitatissimum Lus10035275.g I
Lus10036103.g Linum usitatissimum Lus10036103.g I
Lus10040063.g Linum usitatissimum Lus10040063.g I
MDP0000147309 Malus domestica MDP0000147309 I
MDP0000151688 Malus domestica MDP0000151688 I
MDP0000175835 Malus domestica MDP0000175835 I
MDP0000176798 Malus domestica MDP0000176798 I
MDP0000179306 Malus domestica MDP0000179306 I
MDP0000308617 Malus domestica MDP0000308617 I
mgf002965m Mimulus guttatus mgf002965m I
mgf010934m Mimulus guttatus mgf010934m I
mgf019173m Mimulus guttatus mgf019173m I
mgf020500m Mimulus guttatus mgf020500m I
MLOC_6041 Hordeum vulgare MLOC_6041 I
MTR_1g021230 Medicago truncatula MTR_1g021230 I
MTR_3g011610 Medicago truncatula MTR_3g011610 I
MTR_3g052430 Medicago truncatula MTR_3g052430 I
MTR_8g042410 Medicago truncatula MTR_8g042410 I
myb.Ph3 Petunia x hybrida Q02994_PETHY D
MYB101 Vitis vinifera VIT_12s0059g00700 I
MYB33 Arabidopsis lyrata fgenesh2_kg.6__546__AT5G06100.3 I
MYB97 Arabidopsis thaliana AT4G26930 I
MYB97 Arabidopsis lyrata fgenesh2_kg.7__1539__AT4G26930.1 I
OB01G43550 Oryza brachyantha OB01G43550 I
OB03G32840 Oryza brachyantha OB03G32840 I
OBART01G34660 Oryza barthii OBART01G34660 I
OBART03G24120 Oryza barthii OBART03G24120 I
OGLUM01G20920 Oryza glumaepatula OGLUM01G20920 I
OGLUM03G24880 Oryza glumaepatula OGLUM03G24880 I
OGLUM06G26120 Oryza glumaepatula OGLUM06G26120 I
OLONG_019401 Oryza longistaminata OLONG_019401 I
OLONG_020610 Oryza longistaminata OLONG_020610 I
OLONG_025057 Oryza longistaminata OLONG_025057 I
OMERI01G31990 Oryza meridionalis OMERI01G31990 I
OMERI03G21920 Oryza meridionalis OMERI03G21920 I
OMERI06G24960 Oryza meridionalis OMERI06G24960 I
ONIVA04G15310 Oryza nivara ONIVA04G15310 I
ONIVA06G28020 Oryza nivara ONIVA06G28020 I
OPUNC03G22220 Oryza punctata OPUNC03G22220 I
OPUNC06G18670 Oryza punctata OPUNC06G18670 I
OPUNC06G22490 Oryza punctata OPUNC06G22490 I
orange1.1g046419m.g Citrus sinensis orange1.1g046419m.g I
ORGLA03G0224700 Oryza glaberrima ORGLA03G0224700 I
ORUFI03G24730 Oryza rufipogon ORUFI03G24730 I
ORUFI06G26670 Oryza rufipogon ORUFI06G26670 I
OS03G0578900 Oryza sativa OS03G0578900 I
OS06G0679400 Oryza sativa OS06G0679400 I
Pavir.Ab00447 Panicum virgatum Pavir.Ab00447 I
Pavir.Da00077 Panicum virgatum Pavir.Da00077 I
Pavir.Da00534 Panicum virgatum Pavir.Da00534 I
Pavir.Db00593 Panicum virgatum Pavir.Db00593 I
Pavir.Ea03206 Panicum virgatum Pavir.Ea03206 I
Pavir.Eb03517 Panicum virgatum Pavir.Eb03517 I
Pavir.Ib03827 Panicum virgatum Pavir.Ib03827 I
PGSC0003DMG400005918 Solanum tuberosum PGSC0003DMG400005918 I
PGSC0003DMG400013897 Solanum tuberosum PGSC0003DMG400013897 I
PGSC0003DMG400028949 Solanum tuberosum PGSC0003DMG400028949 I
PK15478.1 Cannabis sativa PK15478.1 I
Pm011812 Prunus mume Pm011812 I
Pm015094 Prunus mume Pm015094 I
Pm016605 Prunus mume Pm016605 I
POPTR_0001s07330 Populus trichocarpa POPTR_0001s07330 I
POPTR_0003s18900 Populus trichocarpa POPTR_0003s18900 I
PRUPE_ppa003628mg Prunus persica PRUPE_ppa003628mg I
PRUPE_ppa017451mg Prunus persica PRUPE_ppa017451mg I
PRUPE_ppa019943mg Prunus persica PRUPE_ppa019943mg I
PRUPE_ppa022465mg Prunus persica PRUPE_ppa022465mg I
SapurV1A.0369s0230 Salix purpurea SapurV1A.0369s0230 I
SapurV1A.0537s0200 Salix purpurea SapurV1A.0537s0200 I
Sb01g015920 Sorghum bicolor Sb01g015920 I
Sb03g037680 Sorghum bicolor Sb03g037680 I
Sb10g023665 Sorghum bicolor Sb10g023665 I
Sb10g027280 Sorghum bicolor Sb10g027280 I
SELMODRAFT_117411 Selaginella moellendorffii SELMODRAFT_117411 I
SELMODRAFT_128781 Selaginella moellendorffii SELMODRAFT_128781 I
SELMODRAFT_81112 Selaginella moellendorffii SELMODRAFT_81112 I
SELMODRAFT_84369 Selaginella moellendorffii SELMODRAFT_84369 I
Si000907m.g Setaria italica Si000907m.g I
Si006555m.g Setaria italica Si006555m.g I
Si007070m.g Setaria italica Si007070m.g I
Si039629m.g Setaria italica Si039629m.g I
Solyc06g073640.2 Solanum lycopersicum Solyc06g073640.2 I
Solyc07g052300.2 Solanum lycopersicum Solyc07g052300.2 I
TCM_011907 Theobroma cacao TCM_011907 I
TCM_030853 Theobroma cacao TCM_030853 I
TCM_041010 Theobroma cacao TCM_041010 I
TCM_044611 Theobroma cacao TCM_044611 I
Thhalv10013018m.g Eutrema salsugineum Thhalv10013018m.g I
Thhalv10013329m.g Eutrema salsugineum Thhalv10013329m.g I
TRAES3BF027700010CFD_g Triticum aestivum TRAES3BF027700010CFD_g I
Traes_6AS_5562B97F7 Triticum aestivum Traes_6AS_5562B97F7 I
Traes_6DS_A0EC5D808 Triticum aestivum Traes_6DS_A0EC5D808 I
Traes_7AL_0AD4A7A87 Triticum aestivum Traes_7AL_0AD4A7A87 I
Traes_7DL_FAF2AE9FB Triticum aestivum Traes_7DL_FAF2AE9FB I
TRIUR3_15006 Triticum urartu TRIUR3_15006 I
TRIUR3_17146 Triticum urartu TRIUR3_17146 I
TRIUR3_20797 Triticum urartu TRIUR3_20797 I
TRIUR3_22706 Triticum urartu TRIUR3_22706 I
TRIUR3_27104 Triticum urartu TRIUR3_27104 I
VIT_06s0009g02480 Vitis vinifera VIT_06s0009g02480 I
VIT_09s0002g01410 Vitis vinifera VIT_09s0002g01410 I
VIT_13s0067g01630 Vitis vinifera VIT_13s0067g01630 I