nLs.2.1.2.g01829 (Litomosoides sigmodontis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 nLs.2.1.2.g01829 T325841_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sma-4
M02484_2.00 		Caenorhabditis elegans
NNCCAGACANN
NNTGTCTGGNN		 PBM
Weirauch et al.(2014)
pTH8996 		0.842 0.842
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t01829-RA SMAD 208 308

Links

Other SMAD family TFs
Other Litomosoides sigmodontis TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000977101 Angiostrongylus cantonensis ACAC_0000977101 I 0.821
ALUE_0001111401 Ascaris lumbricoides ALUE_0001111401 I 0.931
ANCCAN_26651 Ancylostoma caninum ANCCAN_26651 I 0.747
ANCDUO_13021 Ancylostoma duodenale ANCDUO_13021 I 0.861
ASIM_0001219601 Anisakis simplex ASIM_0001219601 I 0.921
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I 0.733
ASU_10605 Ascaris suum ASU_10605 I 0.931
ASU_13433 Ascaris suum ASU_13433 I 0.723
BGLB014287 Biomphalaria glabrata BGLB014287 I 0.703
Bm11291 Brugia malayi Bm11291 I 0.909
Bm3575 Brugia malayi Bm3575 I 0.706
Bm5359 Brugia malayi Bm5359 I 0.960
BTMF_0000404601 Brugia timori BTMF_0000404601 I 0.706
BTMF_0000952301 Brugia timori BTMF_0000952301 I 0.960
BXY_1538500 Bursaphelenchus xylophilus BXY_1538500 I 0.782
CBG09090 Caenorhabditis briggsae CBG09090 I 0.842
CBN31444 Caenorhabditis brenneri CBN31444 I 0.832
CGOC_0000897101 Cylicostephanus goldi CGOC_0000897101 I 0.851
CJA09693 Caenorhabditis japonica CJA09693 I 0.842
CRE04707 Caenorhabditis remanei CRE04707 I 0.832
D918_00298 Trichuris suis D918_00298 I 0.700
DICVIV_05422 Dictyocaulus viviparus DICVIV_05422 I 0.851
EEL_0000707501 Elaeophora elaphi EEL_0000707501 I 0.716
EVEC_0000562301 Enterobius vermicularis EVEC_0000562301 I 0.921
GPLIN_000764400 Globodera pallida GPLIN_000764400 I 0.792
GPUH_0001294301 Gongylonema pulchrum GPUH_0001294301 I 0.911
GPUH_0001329001 Gongylonema pulchrum GPUH_0001329001 I 0.716
Hba_14016 Heterorhabditis bacteriophora Hba_14016 I 0.740
HCOI01928500 Haemonchus contortus HCOI01928500 I 0.842
HCOI02014300 Haemonchus contortus HCOI02014300 I 0.842
HelroG88197 Helobdella robusta HelroG88197 I 0.706
HPBE_0002536701 Heligmosomoides bakeri HPBE_0002536701 I 0.851
L596_g26024 Steinernema carpocapsae L596_g26024 I 0.901
L889_g22387 Steinernema feltiae L889_g22387 I 0.901
L892_g4495 Steinernema scapterisci L892_g4495 I 0.901
L893_g15056 Steinernema glaseri L893_g15056 I 0.891
LOAG_05337 Loa loa LOAG_05337 I 0.951
maker-nMf.1.1.scaf05118-snap-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf05118-snap-gene-0.7 I 0.743
Minc06316 Meloidogyne incognita Minc06316 I 0.752
Minc10272 Meloidogyne incognita Minc10272 I 0.752
nAv.1.0.1.g00430 Acanthocheilonema viteae nAv.1.0.1.g00430 I 0.716
nAv.1.0.1.g08553 Acanthocheilonema viteae nAv.1.0.1.g08553 I 0.960
NBR_0001377901 Nippostrongylus brasiliensis NBR_0001377901 I 0.851
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I 0.733
nDi.2.2.2.g06233 Dirofilaria immitis nDi.2.2.2.g06233 I 0.960
nLs.2.1.2.g01457 Litomosoides sigmodontis nLs.2.1.2.g01457 I 0.716
nOo.2.0.1.g00181 Onchocerca ochengi nOo.2.0.1.g00181 I 0.716
nOo.2.0.1.g06266 Onchocerca ochengi nOo.2.0.1.g06266 I 0.960
OFLC_0000505301 Onchocerca flexuosa OFLC_0000505301 I 0.960
Ppa-sma-4 Pristionchus pacificus PPA17857 I 0.851
PTRK_0001020700 Parastrongyloides trichosuri PTRK_0001020700 I 0.822
RSKR_0000114900 Rhabditophanes kr3021 RSKR_0000114900 I 0.832
scaffold21-EXSNAP2012.60 Pristionchus exspectatus scaffold21-EXSNAP2012.60 I 0.851
sma-4 Caenorhabditis elegans WBGene00004858 D 0.842
SMAD4 Homo sapiens ENSG00000141646 D 0.709
SPAL_0001099400 Strongyloides papillosus SPAL_0001099400 I 0.832
SSTP_0000769000 Strongyloides stercoralis SSTP_0000769000 I 0.832
SVE_0858500 Strongyloides venezuelensis SVE_0858500 I 0.832
TCLT_0000412001 Thelazia callipaeda TCLT_0000412001 I 0.941
TELCIR_06960 Teladorsagia circumcincta TELCIR_06960 I 0.842
TELCIR_11814 Teladorsagia circumcincta TELCIR_11814 I 0.782
WBGene00241622 Onchocerca volvulus WBGene00241622 I 0.716
WBGene00245700 Onchocerca volvulus WBGene00245700 I 0.960
WUBG_02880 Wuchereria bancrofti WUBG_02880 I 0.706
WUBG_08631 Wuchereria bancrofti WUBG_08631 I 0.960