SMU15005679 (Schmidtea mediterranea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SMU15005679 T335000_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15005679 Sox 27 95

Links

Other Sox family TFs
Other Schmidtea mediterranea TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL010903 Aedes aegypti AAEL010903 N 0.649
AAH41216 Xenopus laevis AAH41216 N 0.624
AALB002196 Anopheles albimanus AALB002196 N 0.602
AARA006951 Anopheles arabiensis AARA006951 N 0.602
AATE020748 Anopheles atroparvus AATE020748 N 0.602
AC123471.1 Rattus norvegicus ENSRNOG00000018377 N 0.614
ACAC_0000207501 Angiostrongylus cantonensis ACAC_0000207501 N 0.431
ACEP21543 Atta cephalotes ACEP21543 N 0.641
ACHR000824 Anopheles christyi ACHR000824 N 0.602
ACOM023536 Anopheles coluzzii ACOM023536 N 0.602
ACUA002517 Anopheles culicifacies ACUA002517 N 0.602
ACYPI008028 Acyrthosiphon pisum ACYPI008028 N 0.621
ADAC004863 Anopheles darlingi ADAC004863 N 0.602
ADIR010513 Anopheles dirus ADIR010513 N 0.602
AEPI007457 Anopheles epiroticus AEPI007457 N 0.602
AFAF004631 Anopheles farauti AFAF004631 N 0.602
AFUN008276 Anopheles funestus AFUN008276 N 0.602
AGAP001994 Anopheles gambiae AGAP001994 N 0.602
AMAM007470 Anopheles maculatus AMAM007470 N 0.602
AMEC010472 Anopheles melas AMEC010472 N 0.602
AMEM015770 Anopheles merus AMEM015770 N 0.602
AMIN003302 Anopheles minimus AMIN003302 N 0.602
ANCCAN_03785 Ancylostoma caninum ANCCAN_03785 N 0.431
ANCCAN_09575 Ancylostoma caninum ANCCAN_09575 N 0.431
ANCCEY_02937 Ancylostoma ceylanicum ANCCEY_02937 N 0.431
ANCDUO_12071 Ancylostoma duodenale ANCDUO_12071 N 0.431
Aqu1.224100 Amphimedon queenslandica Aqu1.224100 N 0.481
AQUA007127 Anopheles quadriannulatus AQUA007127 N 0.602
ASIS021704 Anopheles sinensis ASIS021704 N 0.602
ASTEI00336 Anopheles stephensi ASTEI00336 N 0.602
A_05744 Schistosoma haematobium A_05744 N 0.713
BGIBMGA009228 Bombyx mori BGIBMGA009228 N 0.578
Bm7076 Brugia malayi Bm7076 N 0.428
CapteG156119 Capitella teleta CapteG156119 N 0.620
Cflo_00654--XP_395543.3_APIME Camponotus floridanus Cflo_00654--XP_395543.3_APIME N 0.641
CLEC001104 Cimex lectularius CLEC001104 N 0.595
CLEC007658 Cimex lectularius CLEC007658 N 0.480
CLEC009203 Cimex lectularius CLEC009203 N 0.628
CPIJ007400 Culex quinquefasciatus CPIJ007400 N 0.649
CPIJ018416 Culex quinquefasciatus CPIJ018416 N 0.649
CpipJ_CPIJ007400 Culex pipiens CpipJ_CPIJ007400 N 0.649
CpipJ_CPIJ018416 Culex pipiens CpipJ_CPIJ018416 N 0.649
csin103376 Clonorchis sinensis csin103376 N 0.646
D915_15883 Fasciola hepatica D915_15883 N 0.715
D918_01415 Trichuris suis D918_01415 N 0.530
dalao Drosophila melanogaster FBgn0030093 N 0.537
DAPPUDRAFT_305068 Daphnia pulex DAPPUDRAFT_305068 N 0.645
DILT_0001977801 Diphyllobothrium latum DILT_0001977801 N 0.450
DME_0000063901 Dracunculus medinensis DME_0000063901 N 0.435
ECANG7_05376 Echinococcus canadensis ECANG7_05376 N 0.701
EEL_0000522201 Elaeophora elaphi EEL_0000522201 N 0.428
EmuJ_000113200 Echinococcus multilocularis EmuJ_000113200 N 0.701
ENSCING00000007774 Ciona intestinalis ENSCING00000007774 N 0.602
ENSCJAG00000006608 Callithrix jacchus ENSCJAG00000006608 N 0.556
ENSCSAVG00000010367 Ciona savignyi ENSCSAVG00000010367 N 0.550
ENSFCAG00000026463 Felis catus ENSFCAG00000026463 N 0.585
ENSGGOG00000024929 Gorilla gorilla ENSGGOG00000024929 N 0.585
ENSGGOG00000026277 Gorilla gorilla ENSGGOG00000026277 N 0.525
ENSGMOG00000002045 Gadus morhua ENSGMOG00000002045 N 0.642
ENSOCUG00000016848 Oryctolagus cuniculus ENSOCUG00000016848 N 0.618
ENSONIG00000006293 Oreochromis niloticus ENSONIG00000006293 N 0.642
ENSPFOG00000009890 Poecilia formosa ENSPFOG00000009890 N 0.642
ENSPFOG00000019561 Poecilia formosa ENSPFOG00000019561 N 0.642
ENSPPYG00000012585 Pongo abelii ENSPPYG00000012585 N 0.532
ENSXMAG00000002642 Xiphophorus maculatus ENSXMAG00000002642 N 0.642
EVEC_0000378901 Enterobius vermicularis EVEC_0000378901 N 0.449
fgenesh2_pg.scaffold_137000001 Branchiostoma floridae fgenesh2_pg.scaffold_137000001 N 0.540
GA26137 Drosophila pseudoobscura FBgn0247513 N 0.565
GB50847 Apis mellifera GB50847 N 0.641
GD16931 Drosophila simulans FBgn0188511 N 0.537
GE15824 Drosophila yakuba FBgn0233388 N 0.537
GF19131 Drosophila ananassae FBgn0096142 N 0.532
GG18291 Drosophila erecta FBgn0110507 N 0.537
GH12291 Drosophila grimshawi FBgn0119770 N 0.532
GI15536 Drosophila mojavensis FBgn0138285 N 0.495
GJ14880 Drosophila virilis FBgn0202084 N 0.495
GK25765 Drosophila willistoni FBgn0227724 N 0.532
GL26801 Drosophila persimilis FBgn0164382 N 0.565
GM13722 Drosophila sechellia FBgn0168653 N 0.537
HCOI00022200 Haemonchus contortus HCOI00022200 N 0.431
HCOI00569400 Haemonchus contortus HCOI00569400 N 0.431
HDID_0000207001 Hymenolepis diminuta HDID_0000207001 N 0.693
HelroG188630 Helobdella robusta HelroG188630 N 0.662
HHAL002088-PA Halyomorpha halys HHAL002088-PA N 0.641
HHAL007378-PA Halyomorpha halys HHAL007378-PA N 0.618
HMEL010720 Heliconius melpomene HMEL010720 N 0.610
HPBE_0000083501 Heligmosomoides bakeri HPBE_0000083501 N 0.431
HPLM_0001658301 Haemonchus placei HPLM_0001658301 N 0.431
Hsal_01302--XP_395543.3_APIME Harpegnathos saltator Hsal_01302--XP_395543.3_APIME N 0.641
ISCW021016 Ixodes scapularis ISCW021016 N 0.631
KGM_12870 Danaus plexippus KGM_12870 N 0.610
L798_00593 Zootermopsis nevadensis L798_00593 N 0.641
LCUP013669 Lucilia cuprina LCUP013669 N 0.559
LDEC003494 Leptinotarsa decemlineata LDEC003494 N 0.641
LLOJ006040 Lutzomyia longipalpis LLOJ006040 N 0.639
LOAG_01279 Loa loa LOAG_01279 N 0.428
LotgiG111061 Lottia gigantea LotgiG111061 N 0.596
maker-nMf.1.1.scaf01126-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01126-augustus-gene-0.13 N 0.436
MCOS_0000928101 Mesocestoides corti MCOS_0000928101 N 0.693
MDOA009352 Musca domestica MDOA009352 N 0.530
MhA1_Contig1809.frz3.gene8 Meloidogyne hapla MhA1_Contig1809.frz3.gene8 N 0.436
Minc14081 Meloidogyne incognita Minc14081 N 0.436
ML45008a Mnemiopsis leidyi ML45008a N 0.429
nAv.1.0.1.g03900 Acanthocheilonema viteae nAv.1.0.1.g03900 N 0.428
nDi.2.2.2.g02092 Dirofilaria immitis nDi.2.2.2.g02092 N 0.428
NECAME_16117 Necator americanus NECAME_16117 N 0.431
NEMVEDRAFT_v1g177453 Nematostella vectensis NEMVEDRAFT_v1g177453 N 0.627
nLs.2.1.2.g01047 Litomosoides sigmodontis nLs.2.1.2.g01047 N 0.428
nOo.2.0.1.g01360 Onchocerca ochengi nOo.2.0.1.g01360 N 0.428
NV11999 Nasonia vitripennis NV11999 N 0.643
OESDEN_12607 Oesophagostomum dentatum OESDEN_12607 N 0.431
OESDEN_21929 Oesophagostomum dentatum OESDEN_21929 N 0.431
OFLC_0001285101 Onchocerca flexuosa OFLC_0001285101 N 0.428
PPAI002058 Phlebotomus papatasi PPAI002058 N 0.639
PXEA_0001727801 Protopolystoma xenopodis PXEA_0001727801 N 0.722
RSKR_0000347900 Rhabditophanes kr3021 RSKR_0000347900 N 0.434
Sakowv30017721m.g Saccoglossus kowalevskii Sakowv30017721m.g N 0.627
SCUD_0000923501 Schistosoma curassoni SCUD_0000923501 N 0.713
Sjc_0000110 Schistosoma japonicum Sjc_0000110 N 0.713
SMAR004982 Strigamia maritima SMAR004982 N 0.622
SMARCE1 Gasterosteus aculeatus ENSGACG00000018114 N 0.612
smarce1 Oryzias latipes ENSORLG00000018629 N 0.642
smarce1 Tetraodon nigroviridis ENSTNIG00000014009 N 0.642
smarce1 Takifugu rubripes ENSTRUG00000012899 N 0.642
Smp_154640 Schistosoma mansoni Smp_154640 N 0.713
SMTD_0000014601 Schistosoma mattheei SMTD_0000014601 N 0.713
SMU15003232 Schmidtea mediterranea SMU15003232 N 0.437
SMU15025606 Schmidtea mediterranea SMU15025606 N 0.712
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 N 0.436
SPU_009282 Strongylocentrotus purpuratus SPU_009282 N 0.613
SROB_0000607501 Schistosoma rodhaini SROB_0000607501 N 0.713
SSLN_0001888901 Schistocephalus solidus SSLN_0001888901 N 0.617
SVUK_0000819801 Strongylus vulgaris SVUK_0000819801 N 0.431
T265_02983 Opisthorchis viverrini T265_02983 N 0.715
TASK_0000875901 Taenia asiatica TASK_0000875901 N 0.701
TC007745 Tribolium castaneum TC007745 N 0.641
TCLT_0000145301 Thelazia callipaeda TCLT_0000145301 N 0.428
TELCIR_14354 Teladorsagia circumcincta TELCIR_14354 N 0.431
TMUE_s0023006500 Trichuris muris TMUE_s0023006500 N 0.530
TriadG53566 Trichoplax adhaerens TriadG53566 N 0.579
TsM_000047400 Taenia solium TsM_000047400 N 0.701
TTAC_0000838901 Hydatigera taeniaeformis TTAC_0000838901 N 0.436
TTRE_0000149701 Trichuris trichiura TTRE_0000149701 N 0.530
WBGene00245293 Onchocerca volvulus WBGene00245293 N 0.428
WUBG_07283 Wuchereria bancrofti WUBG_07283 N 0.428
XP_002158206.1 Hydra magnipapillata XP_002158206.1 N 0.480
YQE_02381 Dendroctonus ponderosae YQE_02381 N 0.641