Bo2g055640 (Brassica oleracea)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Bo2g055640 T343726_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP1
M07276_2.00 		Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY		 Dap-seq
OMalley et al.(2016)
TCP1_col_a 		0.898 0.492
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.862 0.407
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.837 0.407
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g055640.1 TCP 84 235

Links

Other TCP family TFs
Other Brassica oleracea TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29846.m000184 Ricinus communis 29846.m000184 I
Aquca_003_00045 Aquilegia coerulea Aquca_003_00045 I
Bo1g144510 Brassica oleracea Bo1g144510 I
Bo5g139340 Brassica oleracea Bo5g139340 I
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I
Bra029762 Brassica rapa Bra029762 I
Bra034067 Brassica rapa Bra034067 I
BRADI2G54640 Brachypodium distachyon BRADI2G54640 I
Cagra.0487s0012 Capsella grandiflora Cagra.0487s0012 I
Carubv10000643m.g Capsella rubella Carubv10000643m.g I
cassava9078.m1 Manihot esculenta cassava9078.m1 I
Ca_21127 Cicer arietinum Ca_21127 I
chr1.CM0147.520.nd Lotus japonicus chr1.CM0147.520.nd I
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I
Cucsa.175460 Cucumis sativus Cucsa.175460 I
Eucgr.K03133 Eucalyptus grandis Eucgr.K03133 I
evm.TU.supercontig_228.17 Carica papaya evm.TU.supercontig_228.17 I
e_gw1.3.910.1 Micromonas pusilla e_gw1.3.910.1 N
F775_10106 Aegilops tauschii F775_10106 I
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I
GLYMA07G15820 Glycine max GLYMA07G15820 I
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I
GRMZM2G081919 Zea mays GRMZM2G081919 I
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I
LPERR01G31650 Leersia perrieri LPERR01G31650 I
Lus10024394.g Linum usitatissimum Lus10024394.g I
Lus10025351.g Linum usitatissimum Lus10025351.g I
MDP0000219581 Malus domestica MDP0000219581 I
MLOC_50701 Hordeum vulgare MLOC_50701 N
MTR_7g061330 Medicago truncatula MTR_7g061330 I
MTR_7g461410 Medicago truncatula MTR_7g461410 I
MYB3R-2 Oryza sativa OS01G0841500 I
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I
OPUNC01G35700 Oryza punctata OPUNC01G35700 N
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I
PDK_20s1314361g001 Phoenix dactylifera PDK_20s1314361g001 N
Pm002704 Prunus mume Pm002704 I
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I
Sb03g039470 Sorghum bicolor Sb03g039470 I
SELMODRAFT_75978 Selaginella moellendorffii SELMODRAFT_75978 I
Si000842m.g Setaria italica Si000842m.g I
TCM_021936 Theobroma cacao TCM_021936 I
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I
TRIUR3_33469 Triticum urartu TRIUR3_33469 N
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I