Pavir.Fa00930 (Panicum virgatum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Pavir.Fa00930 T345001_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fa00930.1.p TCP 5 109

Links

Other TCP family TFs
Other Panicum virgatum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29729.m002369 Ricinus communis 29729.m002369 I
29915.m000479 Ricinus communis 29915.m000479 I
AC205562.3_FG002 Zea mays AC205562.3_FG002 I
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I
BGIOSGA034615 Oryza indica BGIOSGA034615 N
BGIOSGA036759 Oryza indica BGIOSGA036759 N
BGIOSGA040489 Oryza indica BGIOSGA040489 I
Bo01002s040 Brassica oleracea Bo01002s040 I
Bo4g012750 Brassica oleracea Bo4g012750 I
Bo5g068250 Brassica oleracea Bo5g068250 I
Bra002421 Brassica rapa Bra002421 I
Bra023211 Brassica rapa Bra023211 I
Bra028918 Brassica rapa Bra028918 I
BRADI1G63220 Brachypodium distachyon BRADI1G63220 I
BRADI4G25717 Brachypodium distachyon BRADI4G25717 N
Carubv10022120m.g Capsella rubella Carubv10022120m.g I
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I
Ca_09495 Cicer arietinum Ca_09495 I
Ca_12915 Cicer arietinum Ca_12915 I
Ca_18932 Cicer arietinum Ca_18932 I
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I
Cla018337 Citrullus lanatus Cla018337 I
Cucsa.177060 Cucumis sativus Cucsa.177060 I
Eucgr.G03145 Eucalyptus grandis Eucgr.G03145 I
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I
F775_07376 Aegilops tauschii F775_07376 I
F775_25840 Aegilops tauschii F775_25840 I
F775_28648 Aegilops tauschii F775_28648 N
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I
GLYMA03G00460 Glycine max GLYMA03G00460 I
GLYMA09G41050 Glycine max GLYMA09G41050 I
GLYMA13G34240 Glycine max GLYMA13G34240 I
GLYMA13G34251 Glycine max GLYMA13G34251 I
GLYMA13G34261 Glycine max GLYMA13G34261 I
GLYMA13G34281 Glycine max GLYMA13G34281 I
GLYMA16G34590 Glycine max GLYMA16G34590 I
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I
GRMZM2G030272 Zea mays GRMZM2G030272 N
GRMZM2G063216 Zea mays GRMZM2G063216 N
GRMZM2G324999 Zea mays GRMZM2G324999 I
GSMUA_Achr6G05710_001 Musa acuminata GSMUA_Achr6G05710_001 I
GSMUA_Achr8G01730_001 Musa acuminata GSMUA_Achr8G01730_001 I
GSMUA_Achr9G04830_001 Musa acuminata GSMUA_Achr9G04830_001 I
LPERR08G11030 Leersia perrieri LPERR08G11030 I
LPERR09G04330 Leersia perrieri LPERR09G04330 I
LPERR11G00950 Leersia perrieri LPERR11G00950 N
LPERR12G01060 Leersia perrieri LPERR12G01060 N
Lus10025133.g Linum usitatissimum Lus10025133.g I
Lus10025216.g Linum usitatissimum Lus10025216.g I
Lus10030517.g Linum usitatissimum Lus10030517.g I
MLOC_34522 Hordeum vulgare MLOC_34522 N
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I
MTR_2g075610 Medicago truncatula MTR_2g075610 I
MTR_2g075680 Medicago truncatula MTR_2g075680 I
MTR_2g075690 Medicago truncatula MTR_2g075690 I
MTR_2g075750 Medicago truncatula MTR_2g075750 I
MTR_5g067700 Medicago truncatula MTR_5g067700 I
MTR_7g073380 Medicago truncatula MTR_7g073380 I
MTR_7g073430 Medicago truncatula MTR_7g073430 I
MTR_8g005750 Medicago truncatula MTR_8g005750 I
MTR_8g032510 Medicago truncatula MTR_8g032510 N
OB09G14040 Oryza brachyantha OB09G14040 I
OB11G10740 Oryza brachyantha OB11G10740 N
OB12G11010 Oryza brachyantha OB12G11010 N
OBART09G06020 Oryza barthii OBART09G06020 I
OBART11G01090 Oryza barthii OBART11G01090 N
OBART12G00820 Oryza barthii OBART12G00820 N
OGLUM07G10380 Oryza glumaepatula OGLUM07G10380 I
OGLUM09G06630 Oryza glumaepatula OGLUM09G06630 I
OGLUM12G01270 Oryza glumaepatula OGLUM12G01270 N
OMERI08G11390 Oryza meridionalis OMERI08G11390 I
OMERI09G04750 Oryza meridionalis OMERI09G04750 I
ONIVA08G13920 Oryza nivara ONIVA08G13920 I
ONIVA11G01030 Oryza nivara ONIVA11G01030 N
OPUNC09G05480 Oryza punctata OPUNC09G05480 I
OPUNC11G00940 Oryza punctata OPUNC11G00940 N
OPUNC12G00960 Oryza punctata OPUNC12G00960 N
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I
ORGLA08G0116200 Oryza glaberrima ORGLA08G0116200 I
ORGLA11G0201700 Oryza glaberrima ORGLA11G0201700 N
ORGLA12G0007300 Oryza glaberrima ORGLA12G0007300 N
ORUFI08G15010 Oryza rufipogon ORUFI08G15010 I
ORUFI11G01040 Oryza rufipogon ORUFI11G01040 N
ORUFI12G01160 Oryza rufipogon ORUFI12G01160 N
OS08G0386200 Oryza sativa OS08G0386200 I
OS11G0116900 Oryza sativa OS11G0116900 N
OS12G0116400 Oryza sativa OS12G0116400 N
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I
Pavir.Fa01520 Panicum virgatum Pavir.Fa01520 I
Pavir.Ib01500 Panicum virgatum Pavir.Ib01500 N
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I
Pavir.J05812 Panicum virgatum Pavir.J05812 I
Pavir.J31578 Panicum virgatum Pavir.J31578 N
Pavir.J37854 Panicum virgatum Pavir.J37854 I
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I
PDK_20s1519811g001 Phoenix dactylifera PDK_20s1519811g001 I
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I
PDK_20s1521921g002 Phoenix dactylifera PDK_20s1521921g002 I
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I
Pm003014 Prunus mume Pm003014 I
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I
SapurV1A.0035s0630 Salix purpurea SapurV1A.0035s0630 I
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I
Sb01g036870 Sorghum bicolor Sb01g036870 N
Sb07g019400 Sorghum bicolor Sb07g019400 I
Si011007m.g Setaria italica Si011007m.g N
Si015433m.g Setaria italica Si015433m.g I
Si025181m.g Setaria italica Si025181m.g I
Si026831m.g Setaria italica Si026831m.g N
Si036565m.g Setaria italica Si036565m.g I
Si039519m.g Setaria italica Si039519m.g N
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I
TCM_019689 Theobroma cacao TCM_019689 I
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I
Traes_2BS_B65714572 Triticum aestivum Traes_2BS_B65714572 I
Traes_4AL_9E0D1CFA6 Triticum aestivum Traes_4AL_9E0D1CFA6 N
Traes_4BS_A6D9EB0E5 Triticum aestivum Traes_4BS_A6D9EB0E5 N
Traes_4DS_FE38A59D0 Triticum aestivum Traes_4DS_FE38A59D0 N
TRIUR3_14306 Triticum urartu TRIUR3_14306 I
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I
WRKY38 Arabidopsis thaliana AT5G22570 D
WRKY38 Arabidopsis lyrata scaffold_602308.1 I