CSUB01_08239 (Colletotrichum sublineola)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 CSUB01_08239 T365890_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HCBG_05620
M02579_2.00 		Histoplasma capsulatum
NNNCGGNHNN
NNDNCCGNNN		 PBM
Weirauch et al.(2014)
pTH8594 		0.569 0.675
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDN62836 Zinc cluster 215 258

Links

Other Zinc cluster family TFs
Other Colletotrichum sublineola TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29851.m002498 Ricinus communis 29851.m002498 I 0.000
Bo1g115980 Brassica oleracea Bo1g115980 I 0.000
Bostr.19424s0762 Boechera stricta Bostr.19424s0762 I 0.000
Cagra.5105s0003 Capsella grandiflora Cagra.5105s0003 I 0.000
Carubv10015637m.g Capsella rubella Carubv10015637m.g I 0.000
cassava29880.valid.m1 Manihot esculenta cassava29880.valid.m1 I 0.000
Ca_13671 Cicer arietinum Ca_13671 N 0.000
Ca_14825 Cicer arietinum Ca_14825 N 0.000
chr2.CM0308.470.nd Lotus japonicus chr2.CM0308.470.nd I 0.000
chr3.LjT23H01.130.nc Lotus japonicus chr3.LjT23H01.130.nc N 0.000
gene31955-v1.0-hybrid Fragaria vesca gene31955-v1.0-hybrid I 0.000
GLYMA07G21160 Glycine max GLYMA07G21160 I 0.000
GLYMA11G13210 Glycine max GLYMA11G13210 N 0.000
GLYMA12G05250 Glycine max GLYMA12G05250 N 0.000
GLYMA20G01130 Glycine max GLYMA20G01130 N 0.000
Gorai.002G006500 Gossypium raimondii Gorai.002G006500 I 0.000
Gorai.005G240900 Gossypium raimondii Gorai.005G240900 I 0.000
Gorai.012G150900 Gossypium raimondii Gorai.012G150900 I 0.000
Gorai.013G040000 Gossypium raimondii Gorai.013G040000 I 0.000
MDP0000238744 Malus domestica MDP0000238744 N 0.000
MDP0000555456 Malus domestica MDP0000555456 N 0.000
MTR_1g034210 Medicago truncatula MTR_1g034210 N 0.000
MTR_1g034240 Medicago truncatula MTR_1g034240 N 0.000
MTR_4g068320 Medicago truncatula MTR_4g068320 N 0.000
PK10791.1 Cannabis sativa PK10791.1 I 0.000
Pm021537 Prunus mume Pm021537 N 0.000
POPTR_0004s15400 Populus trichocarpa POPTR_0004s15400 I 0.000
POPTR_0009s11170 Populus trichocarpa POPTR_0009s11170 I 0.000
PRUPE_ppa006275mg Prunus persica PRUPE_ppa006275mg I 0.000
SapurV1A.0979s0040 Salix purpurea SapurV1A.0979s0040 I 0.000
SapurV1A.2089s0010 Salix purpurea SapurV1A.2089s0010 I 0.000
TCM_006971 Theobroma cacao TCM_006971 I 0.000
VRN1 Arabidopsis thaliana AT3G18990 D 0.000
VRN1 Arabidopsis lyrata fgenesh2_kg.3__2116__AT3G18990.1 I 0.000