PFICI_01957 (Pestalotiopsis fici)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 PFICI_01957 T377861_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUTE1DRAFT_72988
M02580_2.00 		Neurospora tetrasperma
NNHRNNNNNN
NNNNNNYDNN		 PBM
Weirauch et al.(2014)
pTH9670 		0.543 0.821
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ETS88129 Zinc cluster 49 87

Links

Other Zinc cluster family TFs
Other Pestalotiopsis fici TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo5g098280 Brassica oleracea Bo5g098280 I
Bostr.19424s0443 Boechera stricta Bostr.19424s0443 I
Bra031330 Brassica rapa Bra031330 I
Cagra.2420s0008 Capsella grandiflora Cagra.2420s0008 I
Carubv10013009m.g Capsella rubella Carubv10013009m.g I
cassava31125.valid.m1 Manihot esculenta cassava31125.valid.m1 I
cassava31126.valid.m1 Manihot esculenta cassava31126.valid.m1 I
cassava31127.valid.m1 Manihot esculenta cassava31127.valid.m1 I
cassava31128.valid.m1 Manihot esculenta cassava31128.valid.m1 I
Cucsa.180080 Cucumis sativus Cucsa.180080 I
Eucgr.A00908 Eucalyptus grandis Eucgr.A00908 I
evm.TU.supercontig_8.288 Carica papaya evm.TU.supercontig_8.288 I
FHY3 Vitis vinifera VIT_03s0017g01780 I
FHY3 Arabidopsis thaliana AT3G22170 D
gene24214-v1.0-hybrid Fragaria vesca gene24214-v1.0-hybrid I
GLYMA04G14850 Glycine max GLYMA04G14850 I
GLYMA06G47210 Glycine max GLYMA06G47210 I
Gorai.005G134200 Gossypium raimondii Gorai.005G134200 I
MDP0000286803 Malus domestica MDP0000286803 I
mgf009829m Mimulus guttatus mgf009829m I
mgf014333m Mimulus guttatus mgf014333m I
PK08903.1 Cannabis sativa PK08903.1 I
Pm014859 Prunus mume Pm014859 I
POPTR_0006s02150 Populus trichocarpa POPTR_0006s02150 I
POPTR_0016s01980 Populus trichocarpa POPTR_0016s01980 I
PRUPE_ppa001344mg Prunus persica PRUPE_ppa001344mg I
SapurV1A.0154s0240 Salix purpurea SapurV1A.0154s0240 I
SapurV1A.0767s0100 Salix purpurea SapurV1A.0767s0100 I
Solyc07g043270.2 Solanum lycopersicum Solyc07g043270.2 I
TCM_013043 Theobroma cacao TCM_013043 I
Thhalv10020053m.g Eutrema salsugineum Thhalv10020053m.g I