mgf014333m (Mimulus guttatus)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 mgf014333m T181152_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FHY3
M08114_2.00 		Arabidopsis thaliana
NHCACGCGCTNN
NNAGCGCGTGDN		 ChIP-seq
Mathelier et al.(2014)
MA0557.1 		0.833 0.833
FHY3
M09540_2.00 		Arabidopsis thaliana
NHSACGCGCBNN
NNVGCGCGTSDN		 Misc
Heinz et al.(2010)
Arabidopsis-FHY3_GSE30711 		0.833 0.833
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf014333m FAR1 112 215

Links

Other FAR1 family TFs
Other Mimulus guttatus TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mgf009829m Mimulus guttatus mgf009829m I 1.000
Solyc07g043270.2 Solanum lycopersicum Solyc07g043270.2 I 0.967
FHY3 Vitis vinifera VIT_03s0017g01780 I 0.922
Eucgr.A00908 Eucalyptus grandis Eucgr.A00908 I 0.922
GLYMA04G14850 Glycine max GLYMA04G14850 I 0.889
GLYMA06G47210 Glycine max GLYMA06G47210 I 0.889
POPTR_0006s02150 Populus trichocarpa POPTR_0006s02150 I 0.889
PRUPE_ppa001344mg Prunus persica PRUPE_ppa001344mg I 0.889
Pm014859 Prunus mume Pm014859 I 0.889
Cucsa.180080 Cucumis sativus Cucsa.180080 I 0.889
Gorai.005G134200 Gossypium raimondii Gorai.005G134200 I 0.889
cassava31125.valid.m1 Manihot esculenta cassava31125.valid.m1 I 0.878
cassava31126.valid.m1 Manihot esculenta cassava31126.valid.m1 I 0.878
cassava31127.valid.m1 Manihot esculenta cassava31127.valid.m1 I 0.878
cassava31128.valid.m1 Manihot esculenta cassava31128.valid.m1 I 0.878
evm.TU.supercontig_8.288 Carica papaya evm.TU.supercontig_8.288 I 0.878
gene24214-v1.0-hybrid Fragaria vesca gene24214-v1.0-hybrid I 0.878
MDP0000286803 Malus domestica MDP0000286803 I 0.878
SapurV1A.0767s0100 Salix purpurea SapurV1A.0767s0100 I 0.878
PK08903.1 Cannabis sativa PK08903.1 I 0.878
POPTR_0016s01980 Populus trichocarpa POPTR_0016s01980 I 0.856
TCM_013043 Theobroma cacao TCM_013043 I 0.856
SapurV1A.0154s0240 Salix purpurea SapurV1A.0154s0240 I 0.856
FHY3 Arabidopsis thaliana AT3G22170 D 0.833
Bostr.19424s0443 Boechera stricta Bostr.19424s0443 I 0.833
Cagra.2420s0008 Capsella grandiflora Cagra.2420s0008 I 0.833
Carubv10013009m.g Capsella rubella Carubv10013009m.g I 0.833
Thhalv10020053m.g Eutrema salsugineum Thhalv10020053m.g I 0.822
Bra031330 Brassica rapa Bra031330 I 0.800
Bo1g105420 Brassica oleracea Bo1g105420 I 0.789
Bo5g098280 Brassica oleracea Bo5g098280 I 0.789
POPTR_0006s02140 Populus trichocarpa POPTR_0006s02140 I 0.716
Eucgr.C04090 Eucalyptus grandis Eucgr.C04090 I 0.716
SapurV1A.0767s0090 Salix purpurea SapurV1A.0767s0090 I 0.716
TCM_002030 Theobroma cacao TCM_002030 I 0.711
30106.m000672 Ricinus communis 30106.m000672 I 0.711
cassava24584.valid.m1 Manihot esculenta cassava24584.valid.m1 I 0.711
PK04639.1 Cannabis sativa PK04639.1 I 0.711
PRUPE_ppa001511mg Prunus persica PRUPE_ppa001511mg I 0.700
Pm014858 Prunus mume Pm014858 I 0.700
Bostr.0597s0142 Boechera stricta Bostr.0597s0142 I 0.700
gene24215-v1.0-hybrid Fragaria vesca gene24215-v1.0-hybrid I 0.700
Gorai.007G173400 Gossypium raimondii Gorai.007G173400 I 0.700