SapurV1A.0154s0240 (Salix purpurea)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 SapurV1A.0154s0240 T181910_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FHY3
M08114_2.00 		Arabidopsis thaliana
NHCACGCGCTNN
NNAGCGCGTGDN		 ChIP-seq
Mathelier et al.(2014)
MA0557.1 		0.878 0.878
FHY3
M09540_2.00 		Arabidopsis thaliana
NHSACGCGCBNN
NNVGCGCGTSDN		 Misc
Heinz et al.(2010)
Arabidopsis-FHY3_GSE30711 		0.878 0.878
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0154s0240.1.p FAR1 86 188
SapurV1A.0154s0240.2.p FAR1 86 188
SapurV1A.0154s0240.3.p FAR1 86 188
SapurV1A.0154s0240.4.p FAR1 86 188
SapurV1A.0154s0240.5.p FAR1 86 188
SapurV1A.0154s0240.6.p FAR1 86 188
SapurV1A.0154s0240.7.p FAR1 86 188

Links

Other FAR1 family TFs
Other Salix purpurea TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0016s01980 Populus trichocarpa POPTR_0016s01980 I 0.989
SapurV1A.0767s0100 Salix purpurea SapurV1A.0767s0100 I 0.967
POPTR_0006s02150 Populus trichocarpa POPTR_0006s02150 I 0.956
cassava31125.valid.m1 Manihot esculenta cassava31125.valid.m1 I 0.956
cassava31126.valid.m1 Manihot esculenta cassava31126.valid.m1 I 0.956
cassava31127.valid.m1 Manihot esculenta cassava31127.valid.m1 I 0.956
cassava31128.valid.m1 Manihot esculenta cassava31128.valid.m1 I 0.956
Gorai.005G134200 Gossypium raimondii Gorai.005G134200 I 0.956
GLYMA04G14850 Glycine max GLYMA04G14850 I 0.944
GLYMA06G47210 Glycine max GLYMA06G47210 I 0.944
PRUPE_ppa001344mg Prunus persica PRUPE_ppa001344mg I 0.944
Pm014859 Prunus mume Pm014859 I 0.944
MDP0000286803 Malus domestica MDP0000286803 I 0.944
TCM_013043 Theobroma cacao TCM_013043 I 0.933
evm.TU.supercontig_8.288 Carica papaya evm.TU.supercontig_8.288 I 0.933
gene24214-v1.0-hybrid Fragaria vesca gene24214-v1.0-hybrid I 0.933
FHY3 Vitis vinifera VIT_03s0017g01780 I 0.922
PK08903.1 Cannabis sativa PK08903.1 I 0.922
Cucsa.180080 Cucumis sativus Cucsa.180080 I 0.911
Solyc07g043270.2 Solanum lycopersicum Solyc07g043270.2 I 0.889
Eucgr.A00908 Eucalyptus grandis Eucgr.A00908 I 0.889
FHY3 Arabidopsis thaliana AT3G22170 D 0.878
Bostr.19424s0443 Boechera stricta Bostr.19424s0443 I 0.867
Cagra.2420s0008 Capsella grandiflora Cagra.2420s0008 I 0.867
Carubv10013009m.g Capsella rubella Carubv10013009m.g I 0.867
mgf009829m Mimulus guttatus mgf009829m I 0.856
mgf014333m Mimulus guttatus mgf014333m I 0.856
Thhalv10020053m.g Eutrema salsugineum Thhalv10020053m.g I 0.856
Bo5g098280 Brassica oleracea Bo5g098280 I 0.822
Bra031330 Brassica rapa Bra031330 I 0.822
Bo1g105420 Brassica oleracea Bo1g105420 I 0.778
30106.m000672 Ricinus communis 30106.m000672 I 0.744
cassava24584.valid.m1 Manihot esculenta cassava24584.valid.m1 I 0.744
SapurV1A.0767s0090 Salix purpurea SapurV1A.0767s0090 I 0.739
FAR1 Vitis vinifera VIT_03s0017g01810 I 0.733
Gorai.007G173400 Gossypium raimondii Gorai.007G173400 I 0.733
POPTR_0006s02140 Populus trichocarpa POPTR_0006s02140 I 0.727
TCM_002030 Theobroma cacao TCM_002030 I 0.722
PK04639.1 Cannabis sativa PK04639.1 I 0.722
Eucgr.C04090 Eucalyptus grandis Eucgr.C04090 I 0.716
PRUPE_ppa001511mg Prunus persica PRUPE_ppa001511mg I 0.711
Pm014858 Prunus mume Pm014858 I 0.711
gene24215-v1.0-hybrid Fragaria vesca gene24215-v1.0-hybrid I 0.711
GLYMA10G40510 Glycine max GLYMA10G40510 I 0.700
Solyc08g060840.1 Solanum lycopersicum Solyc08g060840.1 I 0.700
Bostr.0597s0142 Boechera stricta Bostr.0597s0142 I 0.700