CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTRG_04376
(
Pyrenophora triticirepentis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PTRG_04376
T379538_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDU47214
Zinc cluster
33
73
SACVPCRKRKSKCDGGTPVCATCTAVYKTECHYDAESESRR
Links
Other
Zinc cluster
family TFs
Other
Pyrenophora triticirepentis
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29780.m001393
Ricinus communis
29780.m001393
N
cassava18078.valid.m1
Manihot esculenta
cassava18078.valid.m1
N
cassava39873.m1
Manihot esculenta
cassava39873.m1
N
chr4.CM0387.290.nc
Lotus japonicus
chr4.CM0387.290.nc
N
Ciclev10015354m.g
Citrus clementina
Ciclev10015354m.g
N
Cla005911
Citrullus lanatus
Cla005911
N
Cucsa.026600
Cucumis sativus
Cucsa.026600
N
Eucgr.G02067
Eucalyptus grandis
Eucgr.G02067
N
evm.TU.supercontig_2.121
Carica papaya
evm.TU.supercontig_2.121
N
gene00620-v1.0-hybrid
Fragaria vesca
gene00620-v1.0-hybrid
N
GLYMA05G26790
Glycine max
GLYMA05G26790
N
GLYMA08G09780
Glycine max
GLYMA08G09780
N
Gorai.002G171200
Gossypium raimondii
Gorai.002G171200
N
Gorai.005G154200
Gossypium raimondii
Gorai.005G154200
N
Gorai.012G183100
Gossypium raimondii
Gorai.012G183100
N
Lus10023543.g
Linum usitatissimum
Lus10023543.g
N
Lus10040427.g
Linum usitatissimum
Lus10040427.g
N
MDP0000320521
Malus domestica
MDP0000320521
N
MDP0000826219
Malus domestica
MDP0000826219
N
orange1.1g022806m.g
Citrus sinensis
orange1.1g022806m.g
N
PGSC0003DMG402029444
Solanum tuberosum
PGSC0003DMG402029444
N
PK28293.1
Cannabis sativa
PK28293.1
N
Pm005924
Prunus mume
Pm005924
N
POPTR_0008s13960
Populus trichocarpa
POPTR_0008s13960
N
POPTR_0010s11180
Populus trichocarpa
POPTR_0010s11180
N
PRUPE_ppa009765mg
Prunus persica
PRUPE_ppa009765mg
N
SapurV1A.0015s0840
Salix purpurea
SapurV1A.0015s0840
N
SapurV1A.0055s0040
Salix purpurea
SapurV1A.0055s0040
N
TCM_011212
Theobroma cacao
TCM_011212
N
VIT_01s0011g06380
Vitis vinifera
VIT_01s0011g06380
N