BRADI3G18070 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI3G18070 T001324_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF8
M01608_2.00 		Arabidopsis thaliana
MGCCGNMNNN
NNNKNCGGCK		 PBM
Weirauch et al.(2014)
pTH8095 		0.695 0.780
ERF8
M06586_2.00 		Arabidopsis thaliana
NYHDYCKCCGCCGYH
DRCGGCGGMGRHDRN		 Dap-seq
OMalley et al.(2016)
ERF8_col_a 		0.695 0.780
ERF8
M06587_2.00 		Arabidopsis thaliana
HNNHDSCGCCGYCRHHDN
NHDDYGRCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
ERF8_colamp_a 		0.695 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G18070.1 AP2 19 70

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00026p00180130 Amborella trichopoda AMTR_s00026p00180130 I 0.709
ATERF-8 Arabidopsis lyrata fgenesh2_kg.1__4394__AT1G53170.1 I 0.694
fgenesh1_pm.C_scaffold_2001935 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001935 N 0.697
ERF8 Arabidopsis thaliana AT1G53170 D 0.695
ERF084 Arabidopsis thaliana AT1G80580 N 0.697
Bostr.20129s0456 Boechera stricta Bostr.20129s0456 N 0.697
Bo3g182770 Brassica oleracea Bo3g182770 I 0.679
Bo5g004090 Brassica oleracea Bo5g004090 I 0.678
Bo3g074840 Brassica oleracea Bo3g074840 I 0.678
Bra001784 Brassica rapa Bra001784 I 0.678
Bra008460 Brassica rapa Bra008460 N 0.687
Bra030957 Brassica rapa Bra030957 I 0.699
Cagra.1472s0014 Capsella grandiflora Cagra.1472s0014 I 0.693
Cagra.1725s0082 Capsella grandiflora Cagra.1725s0082 N 0.697
Carubv10010374m.g Capsella rubella Carubv10010374m.g I 0.693
Carubv10022119m.g Capsella rubella Carubv10022119m.g N 0.697
evm.TU.supercontig_10.125 Carica papaya evm.TU.supercontig_10.125 I 0.716
Ca_20041 Cicer arietinum Ca_20041 I 0.716
Ca_20544 Cicer arietinum Ca_20544 I 0.682
Cla015583 Citrullus lanatus Cla015583 I 0.716
Ciclev10027171m.g Citrus clementina Ciclev10027171m.g I 0.719
orange1.1g047950m.g Citrus sinensis orange1.1g047950m.g I 0.719
Cucsa.105790 Cucumis sativus Cucsa.105790 I 0.716
Eucgr.F03941 Eucalyptus grandis Eucgr.F03941 N 0.711
Thhalv10000556m.g Eutrema salsugineum Thhalv10000556m.g N 0.693
Thhalv10011796m.g Eutrema salsugineum Thhalv10011796m.g I 0.699
Thhalv10019474m.g Eutrema salsugineum Thhalv10019474m.g N 0.693
gene15953-v1.0-hybrid Fragaria vesca gene15953-v1.0-hybrid I 0.713
GLYMA07G03041 Glycine max GLYMA07G03041 I 0.710
GLYMA08G23074 Glycine max GLYMA08G23074 I 0.716
GLYMA18G10290 Glycine max GLYMA18G10290 I 0.679
Gorai.009G125700 Gossypium raimondii Gorai.009G125700 N 0.711
Gorai.006G107500 Gossypium raimondii Gorai.006G107500 I 0.708
MDP0000264187 Malus domestica MDP0000264187 I 0.719
cassava38416.m1 Manihot esculenta cassava38416.m1 I 0.716
MTR_3g053690 Medicago truncatula MTR_3g053690 I 0.715
MTR_4g009260 Medicago truncatula MTR_4g009260 I 0.719
mgf023662m Mimulus guttatus mgf023662m I 0.716
GSMUA_Achr9G11480_001 Musa acuminata GSMUA_Achr9G11480_001 I 0.677
fgenesh1_pg.scaffold_23000002 Physcomitrella patens fgenesh1_pg.scaffold_23000002 I 0.712
POPTR_0017s08090 Populus trichocarpa POPTR_0017s08090 I 0.710
POPTR_0001s32050 Populus trichocarpa POPTR_0001s32050 I 0.716
Pm013734 Prunus mume Pm013734 I 0.719
PRUPE_ppa020928mg Prunus persica PRUPE_ppa020928mg I 0.713
27446.m000475 Ricinus communis 27446.m000475 I 0.716
SapurV1A.1000s0130 Salix purpurea SapurV1A.1000s0130 I 0.710
SapurV1A.0058s0710 Salix purpurea SapurV1A.0058s0710 I 0.716
SELMODRAFT_412693 Selaginella moellendorffii SELMODRAFT_412693 N 0.686
SELMODRAFT_417258 Selaginella moellendorffii SELMODRAFT_417258 N 0.686
SELMODRAFT_428344 Selaginella moellendorffii SELMODRAFT_428344 N 0.680
SELMODRAFT_428599 Selaginella moellendorffii SELMODRAFT_428599 N 0.680
Si014469m.g Setaria italica Si014469m.g I 0.700
Si014474m.g Setaria italica Si014474m.g I 0.677
Solyc12g005960.1 Solanum lycopersicum Solyc12g005960.1 I 0.691
Solyc03g117230.1 Solanum lycopersicum Solyc03g117230.1 N 0.696
PGSC0003DMG400000091 Solanum tuberosum PGSC0003DMG400000091 I 0.678
PGSC0003DMG401013892 Solanum tuberosum PGSC0003DMG401013892 I 0.691
PGSC0003DMG402013892 Solanum tuberosum PGSC0003DMG402013892 I 0.691
Sb07g006190 Sorghum bicolor Sb07g006190 I 0.708
Sb07g006200 Sorghum bicolor Sb07g006200 I 0.708
Sb07g006195 Sorghum bicolor Sb07g006195 I 0.708
Sb07g006210 Sorghum bicolor Sb07g006210 I 0.708
TCM_027348 Theobroma cacao TCM_027348 I 0.710
VIT_09s0002g08830 Vitis vinifera VIT_09s0002g08830 I 0.716
GRMZM2G089995 Zea mays GRMZM2G089995 I 0.700
GRMZM2G020054 Zea mays GRMZM2G020054 I 0.708