Si026882m.g (Setaria italica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Si026882m.g T005335_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.704 0.820
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.704 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si026882m AP2 18 69

Links

Other AP2 family TFs
Other Setaria italica TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_17299 Aegilops tauschii F775_17299 I 0.799
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.691
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.704
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.685
ERF022 Arabidopsis thaliana AT1G33760 I 0.720
ERF021 Arabidopsis thaliana AT1G71450 D 0.704
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.708
BRADI3G45997 Brachypodium distachyon BRADI3G45997 N 0.711
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.804
Bo2g072910 Brassica oleracea Bo2g072910 I 0.704
Bo5g086680 Brassica oleracea Bo5g086680 I 0.718
Bo6g046850 Brassica oleracea Bo6g046850 I 0.694
Bo6g113020 Brassica oleracea Bo6g113020 I 0.694
Bo8g027240 Brassica oleracea Bo8g027240 I 0.726
Bra007975 Brassica rapa Bra007975 I 0.689
Bra010210 Brassica rapa Bra010210 I 0.721
Bra016136 Brassica rapa Bra016136 I 0.701
Bra028009 Brassica rapa Bra028009 I 0.700
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.704
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.700
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.714
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.704
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.738
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.754
Ca_15064 Cicer arietinum Ca_15064 I 0.685
Cla012661 Citrullus lanatus Cla012661 I 0.722
Cla012665 Citrullus lanatus Cla012665 I 0.729
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.723
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.723
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.729
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.722
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.725
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.718
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.715
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.721
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.701
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.736
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.739
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.731
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.728
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.728
GLYMA11G03790 Glycine max GLYMA11G03790 I 0.681
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.716
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.746
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.715
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.799
LPERR02G16700 Leersia perrieri LPERR02G16700 N 0.730
LPERR04G10650 Leersia perrieri LPERR04G10650 N 0.751
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.805
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.699
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.681
Lus10041052.g Linum usitatissimum Lus10041052.g N 0.682
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.728
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.731
MDP0000122739 Malus domestica MDP0000122739 I 0.735
MDP0000122740 Malus domestica MDP0000122740 I 0.735
MDP0000151428 Malus domestica MDP0000151428 I 0.735
MDP0000283350 Malus domestica MDP0000283350 I 0.725
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.736
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.708
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.736
MTR_5g008550 Medicago truncatula MTR_5g008550 I 0.695
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.728
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.783
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.804
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.775
OB02G28310 Oryza brachyantha OB02G28310 N 0.730
OB11G16300 Oryza brachyantha OB11G16300 I 0.797
ORGLA04G0108200 Oryza glaberrima ORGLA04G0108200 N 0.750
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.807
OGLUM02G20980 Oryza glumaepatula OGLUM02G20980 N 0.730
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.807
BGIOSGA006249 Oryza indica BGIOSGA006249 N 0.730
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.807
OMERI02G20440 Oryza meridionalis OMERI02G20440 N 0.730
OMERI04G12360 Oryza meridionalis OMERI04G12360 N 0.750
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.807
ONIVA02G22690 Oryza nivara ONIVA02G22690 N 0.730
ONIVA04G11950 Oryza nivara ONIVA04G11950 N 0.750
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.807
OPUNC02G18630 Oryza punctata OPUNC02G18630 N 0.733
OPUNC04G11630 Oryza punctata OPUNC04G11630 N 0.701
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.807
ORUFI02G21740 Oryza rufipogon ORUFI02G21740 N 0.730
ORUFI04G15010 Oryza rufipogon ORUFI04G15010 N 0.750
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.807
OS02G0558700 Oryza sativa OS02G0558700 N 0.730
OS11G0242300 Oryza sativa OS11G0242300 I 0.807
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.807
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.807
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.722
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.717
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.723
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.730
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.730
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.720
Pm004269 Prunus mume Pm004269 I 0.731
Pm004272 Prunus mume Pm004272 I 0.748
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.731
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.747
27805.m000021 Ricinus communis 27805.m000021 I 0.718
28118.m000034 Ricinus communis 28118.m000034 I 0.721
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.721
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.723
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.725
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.730
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.730
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.725
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.723
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.719
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.715
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.734
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.739
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.807
TCM_036269 Theobroma cacao TCM_036269 I 0.756
TCM_036270 Theobroma cacao TCM_036270 I 0.715
Traes_2BL_9CD6E043A Triticum aestivum Traes_2BL_9CD6E043A I 0.772
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.799
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.799
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.799
TRIUR3_32168 Triticum urartu TRIUR3_32168 I 0.772
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.799
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.751
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.789