CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_036224
(
Theobroma cacao
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
TCM_036224
T005652_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF019
M01092_2.00
Arabidopsis thaliana
CRCCGRCV
BGYCGGYG
PBM
Lambert et al.(2019)
pTH11534
0.750
0.760
ERF019
M06571_2.00
Arabidopsis thaliana
HDYCACCGACAHNNN
NNNDTGTCGGTGRHD
Dap-seq
OMalley et al.(2016)
At1g22810_colamp_a
0.750
0.760
ERF019
M06572_2.00
Arabidopsis thaliana
DYCACCGHCRHHDYC
GRHDDYGDCGGTGRH
Dap-seq
OMalley et al.(2016)
At1g22810_col
0.750
0.760
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY17069
AP2
62
113
RKYKGVRRRRWGKWVSEIRVPGTQERLWLGSYSTPEGAAIAHDIAHYCLRRP
Links
Other
AP2
family TFs
Other
Theobroma cacao
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_102587.1
Arabidopsis lyrata
scaffold_102587.1
I
0.750
fgenesh2_kg.2__1411__AT1G71520.1
Arabidopsis lyrata
fgenesh2_kg.2__1411__AT1G71520.1
I
0.756
ERF020
Arabidopsis thaliana
AT1G71520
I
0.764
ERF019
Arabidopsis thaliana
AT1G22810
D
0.750
Bostr.12659s0135
Boechera stricta
Bostr.12659s0135
I
0.752
Bostr.10273s0198
Boechera stricta
Bostr.10273s0198
I
0.764
Bo7g057680
Brassica oleracea
Bo7g057680
I
0.756
Bo5g038890
Brassica oleracea
Bo5g038890
I
0.764
Bo2g072950
Brassica oleracea
Bo2g072950
I
0.757
Bo6g113060
Brassica oleracea
Bo6g113060
I
0.770
Bra007974
Brassica rapa
Bra007974
I
0.757
Bra012345
Brassica rapa
Bra012345
I
0.764
Bra016133
Brassica rapa
Bra016133
I
0.748
Bra024539
Brassica rapa
Bra024539
I
0.764
Cagra.2418s0007
Capsella grandiflora
Cagra.2418s0007
I
0.764
Cagra.0114s0023
Capsella grandiflora
Cagra.0114s0023
I
0.750
Carubv10022408m.g
Capsella rubella
Carubv10022408m.g
I
0.764
Carubv10011955m.g
Capsella rubella
Carubv10011955m.g
I
0.750
evm.TU.supercontig_21.63
Carica papaya
evm.TU.supercontig_21.63
I
0.770
Ca_15055
Cicer arietinum
Ca_15055
I
0.710
Cla012182
Citrullus lanatus
Cla012182
I
0.714
Ciclev10023345m.g
Citrus clementina
Ciclev10023345m.g
I
0.709
orange1.1g045327m.g
Citrus sinensis
orange1.1g045327m.g
I
0.709
Eucgr.F02967
Eucalyptus grandis
Eucgr.F02967
I
0.761
Thhalv10009842m.g
Eutrema salsugineum
Thhalv10009842m.g
I
0.757
Thhalv10019510m.g
Eutrema salsugineum
Thhalv10019510m.g
I
0.769
GLYMA11G01700
Glycine max
GLYMA11G01700
I
0.702
Lus10009468.g
Linum usitatissimum
Lus10009468.g
I
0.695
Lus10041044.g
Linum usitatissimum
Lus10041044.g
I
0.701
Lus10006179.g
Linum usitatissimum
Lus10006179.g
I
0.707
chr2.CM0018.340.nd
Lotus japonicus
chr2.CM0018.340.nd
I
0.695
cassava8476.m1
Manihot esculenta
cassava8476.m1
I
0.726
MTR_5g008790
Medicago truncatula
MTR_5g008790
I
0.712
POPTR_0019s10220
Populus trichocarpa
POPTR_0019s10220
I
0.696
POPTR_0013s10420
Populus trichocarpa
POPTR_0013s10420
I
0.710
29938.m000611
Ricinus communis
29938.m000611
I
0.726
SapurV1A.2173s0020
Salix purpurea
SapurV1A.2173s0020
I
0.695
SapurV1A.3847s0010
Salix purpurea
SapurV1A.3847s0010
I
0.722
SapurV1A.4200s0010
Salix purpurea
SapurV1A.4200s0010
I
0.722
TRAES3BF106000020CFD_g
Triticum aestivum
TRAES3BF106000020CFD_g
N
0.679