Eucgr.F02967 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.F02967 T008166_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF019
M01092_2.00 		Arabidopsis thaliana
CRCCGRCV
BGYCGGYG		 PBM
Lambert et al.(2019)
pTH11534 		0.749 0.760
ERF019
M06571_2.00 		Arabidopsis thaliana
HDYCACCGACAHNNN
NNNDTGTCGGTGRHD		 Dap-seq
OMalley et al.(2016)
At1g22810_colamp_a 		0.749 0.760
ERF019
M06572_2.00 		Arabidopsis thaliana
DYCACCGHCRHHDYC
GRHDDYGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g22810_col 		0.749 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F02967.1 AP2 12 63

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_102587.1 Arabidopsis lyrata scaffold_102587.1 I 0.749
fgenesh2_kg.2__1411__AT1G71520.1 Arabidopsis lyrata fgenesh2_kg.2__1411__AT1G71520.1 I 0.755
ERF020 Arabidopsis thaliana AT1G71520 I 0.762
ERF019 Arabidopsis thaliana AT1G22810 D 0.749
Bostr.10273s0198 Boechera stricta Bostr.10273s0198 I 0.762
Bostr.12659s0135 Boechera stricta Bostr.12659s0135 I 0.748
Bo7g057680 Brassica oleracea Bo7g057680 I 0.762
Bo6g113060 Brassica oleracea Bo6g113060 I 0.770
Bo5g038890 Brassica oleracea Bo5g038890 I 0.762
Bo2g072950 Brassica oleracea Bo2g072950 I 0.756
Bra007974 Brassica rapa Bra007974 I 0.756
Bra012345 Brassica rapa Bra012345 I 0.762
Bra016133 Brassica rapa Bra016133 I 0.762
Bra024539 Brassica rapa Bra024539 I 0.762
Cagra.2418s0007 Capsella grandiflora Cagra.2418s0007 I 0.762
Cagra.0114s0023 Capsella grandiflora Cagra.0114s0023 I 0.749
Carubv10022408m.g Capsella rubella Carubv10022408m.g I 0.762
Carubv10011955m.g Capsella rubella Carubv10011955m.g I 0.749
evm.TU.supercontig_21.63 Carica papaya evm.TU.supercontig_21.63 I 0.688
Ca_15055 Cicer arietinum Ca_15055 I 0.716
Cla012182 Citrullus lanatus Cla012182 I 0.733
Ciclev10023345m.g Citrus clementina Ciclev10023345m.g I 0.710
orange1.1g045327m.g Citrus sinensis orange1.1g045327m.g I 0.710
Cucsa.088640 Cucumis sativus Cucsa.088640 N 0.692
Thhalv10009842m.g Eutrema salsugineum Thhalv10009842m.g I 0.755
Thhalv10019510m.g Eutrema salsugineum Thhalv10019510m.g I 0.768
GLYMA11G01700 Glycine max GLYMA11G01700 I 0.708
Lus10009468.g Linum usitatissimum Lus10009468.g I 0.721
Lus10006179.g Linum usitatissimum Lus10006179.g I 0.722
Lus10041044.g Linum usitatissimum Lus10041044.g I 0.716
chr2.CM0018.340.nd Lotus japonicus chr2.CM0018.340.nd I 0.701
cassava8476.m1 Manihot esculenta cassava8476.m1 I 0.724
MTR_5g008790 Medicago truncatula MTR_5g008790 I 0.716
POPTR_0019s10220 Populus trichocarpa POPTR_0019s10220 I 0.694
POPTR_0013s10420 Populus trichocarpa POPTR_0013s10420 I 0.709
29938.m000611 Ricinus communis 29938.m000611 I 0.729
SapurV1A.2173s0020 Salix purpurea SapurV1A.2173s0020 I 0.694
SapurV1A.3847s0010 Salix purpurea SapurV1A.3847s0010 I 0.722
SapurV1A.4200s0010 Salix purpurea SapurV1A.4200s0010 I 0.722
PGSC0003DMG400008734 Solanum tuberosum PGSC0003DMG400008734 N 0.689
TCM_036224 Theobroma cacao TCM_036224 I 0.761