Eucgr.F02975 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.F02975 T008168_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.754 0.860
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.754 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F02975.1 AP2 13 64

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_17299 Aegilops tauschii F775_17299 I 0.698
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I 0.694
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.711
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.754
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.706
ERF022 Arabidopsis thaliana AT1G33760 I 0.735
ERF021 Arabidopsis thaliana AT1G71450 D 0.754
Bostr.10273s0203 Boechera stricta Bostr.10273s0203 I 0.710
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.723
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.698
Bo2g072910 Brassica oleracea Bo2g072910 I 0.754
Bo5g086680 Brassica oleracea Bo5g086680 I 0.729
Bo6g046850 Brassica oleracea Bo6g046850 I 0.709
Bo6g094210 Brassica oleracea Bo6g094210 I 0.719
Bo6g113020 Brassica oleracea Bo6g113020 I 0.751
Bo8g027240 Brassica oleracea Bo8g027240 I 0.741
Bra003924 Brassica rapa Bra003924 I 0.719
Bra007975 Brassica rapa Bra007975 I 0.739
Bra010210 Brassica rapa Bra010210 I 0.736
Bra016136 Brassica rapa Bra016136 I 0.751
Bra028009 Brassica rapa Bra028009 I 0.715
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.754
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.723
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.734
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.754
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.786
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.772
Ca_15064 Cicer arietinum Ca_15064 I 0.682
Cla012661 Citrullus lanatus Cla012661 I 0.733
Cla012665 Citrullus lanatus Cla012665 I 0.778
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.771
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I 0.720
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.771
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I 0.720
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.773
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.733
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.773
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.702
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.736
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.751
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.731
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.794
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.722
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.782
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.782
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.770
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.794
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.764
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.698
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.698
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.705
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.800
Lus10041050.g Linum usitatissimum Lus10041050.g I 0.795
Lus10041052.g Linum usitatissimum Lus10041052.g N 0.703
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.782
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.740
MDP0000122739 Malus domestica MDP0000122739 I 0.743
MDP0000122740 Malus domestica MDP0000122740 I 0.743
MDP0000151428 Malus domestica MDP0000151428 I 0.743
MDP0000283350 Malus domestica MDP0000283350 I 0.779
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.802
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.711
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.779
MTR_5g008550 Medicago truncatula MTR_5g008550 I 0.698
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.782
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.692
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.697
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.689
OB11G16300 Oryza brachyantha OB11G16300 I 0.698
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.698
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.698
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.698
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.698
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.698
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.698
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.698
OS11G0242300 Oryza sativa OS11G0242300 I 0.698
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.698
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.698
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.791
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.694
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.714
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.782
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.784
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.714
Pm004269 Prunus mume Pm004269 I 0.779
Pm004272 Prunus mume Pm004272 I 0.735
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.779
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.735
27805.m000021 Ricinus communis 27805.m000021 I 0.736
28118.m000034 Ricinus communis 28118.m000034 I 0.805
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.813
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.714
SapurV1A.0601s0170 Salix purpurea SapurV1A.0601s0170 N 0.683
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.716
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.784
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.784
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.716
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.714
Si026882m.g Setaria italica Si026882m.g I 0.718
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.729
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.753
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.739
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.758
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.698
TCM_036269 Theobroma cacao TCM_036269 I 0.775
TCM_036270 Theobroma cacao TCM_036270 I 0.758
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.698
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.698
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.698
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.698
VIT_15s0046g00310 Vitis vinifera VIT_15s0046g00310 I 0.678
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.753
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I 0.722
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.704