CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cflo_12870--XP_392775.3_APIME
(
Camponotus floridanus
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
Cflo_12870--XP_392775.3_APIME
T015874_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cflo_12870--XP_392775.3_APIME
ARID/BRIGHT
1340
1425
NVKEMMAIKKYLATQSITLTQPPWIGGMEVDLPHLYQTVQNLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYD
Links
Other
ARID/BRIGHT
family TFs
Other
Camponotus floridanus
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Al_scaffold_0007_3741
Arabidopsis lyrata
Al_scaffold_0007_3741
I
scaffold_704060.1
Arabidopsis lyrata
scaffold_704060.1
I
fgenesh2_kg.7__3412__AT5G41200.1
Arabidopsis lyrata
fgenesh2_kg.7__3412__AT5G41200.1
I
AGL51
Arabidopsis thaliana
AT4G02235
I
AGL78
Arabidopsis thaliana
AT5G65330
D
AGL75
Arabidopsis thaliana
AT5G41200
I
AGL76
Arabidopsis thaliana
AT5G40120
I
AGL98
Arabidopsis thaliana
AT5G39810
I
AGL81
Arabidopsis thaliana
AT5G39750
I
AGL77
Arabidopsis thaliana
AT5G38740
I
AGL105
Arabidopsis thaliana
AT5G37415
I
AGL52
Arabidopsis thaliana
AT4G11250
I
Bostr.3751s0043
Boechera stricta
Bostr.3751s0043
I
Bostr.3751s0039
Boechera stricta
Bostr.3751s0039
I
Bostr.3751s0031
Boechera stricta
Bostr.3751s0031
I
Bostr.0568s0255
Boechera stricta
Bostr.0568s0255
I
Bostr.3751s0030
Boechera stricta
Bostr.3751s0030
I
Bostr.3751s0025
Boechera stricta
Bostr.3751s0025
I
Bostr.10058s0014
Boechera stricta
Bostr.10058s0014
I
Bo00615s090
Brassica oleracea
Bo00615s090
I
Bra031864
Brassica rapa
Bra031864
I
Bra025609
Brassica rapa
Bra025609
I
Cagra.1681s0033
Capsella grandiflora
Cagra.1681s0033
I
Carubv10006654m.g
Capsella rubella
Carubv10006654m.g
I
Carubv10007456m.g
Capsella rubella
Carubv10007456m.g
I
Carubv10007591m.g
Capsella rubella
Carubv10007591m.g
I
Carubv10015354m.g
Capsella rubella
Carubv10015354m.g
I
Carubv10015986m.g
Capsella rubella
Carubv10015986m.g
I
Thhalv10005313m.g
Eutrema salsugineum
Thhalv10005313m.g
I
Thhalv10028282m.g
Eutrema salsugineum
Thhalv10028282m.g
I