cassava18077.valid.m1 (Manihot esculenta)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 cassava18077.valid.m1 T024792_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava18077.valid.m1 BBR 1 279

Links

Other BBR family TFs
Other Manihot esculenta TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK28293.1 Cannabis sativa PK28293.1 N 0.794
evm.TU.supercontig_2.121 Carica papaya evm.TU.supercontig_2.121 N 0.812
Cla005911 Citrullus lanatus Cla005911 N 0.768
Ciclev10015354m.g Citrus clementina Ciclev10015354m.g N 0.799
orange1.1g022806m.g Citrus sinensis orange1.1g022806m.g N 0.824
Cucsa.026600 Cucumis sativus Cucsa.026600 N 0.746
Eucgr.G02067 Eucalyptus grandis Eucgr.G02067 N 0.784
gene00620-v1.0-hybrid Fragaria vesca gene00620-v1.0-hybrid N 0.768
GLYMA08G09780 Glycine max GLYMA08G09780 N 0.765
GLYMA05G26790 Glycine max GLYMA05G26790 N 0.765
Gorai.012G183100 Gossypium raimondii Gorai.012G183100 N 0.739
Gorai.005G154200 Gossypium raimondii Gorai.005G154200 N 0.746
Gorai.002G171200 Gossypium raimondii Gorai.002G171200 N 0.805
Lus10040427.g Linum usitatissimum Lus10040427.g N 0.746
Lus10023543.g Linum usitatissimum Lus10023543.g N 0.728
chr4.CM0387.290.nc Lotus japonicus chr4.CM0387.290.nc N 0.801
MDP0000320521 Malus domestica MDP0000320521 N 0.812
MDP0000826219 Malus domestica MDP0000826219 N 0.824
cassava39873.m1 Manihot esculenta cassava39873.m1 N 0.952
cassava18078.valid.m1 Manihot esculenta cassava18078.valid.m1 N 1.000
POPTR_0010s11180 Populus trichocarpa POPTR_0010s11180 N 0.835
POPTR_0008s13960 Populus trichocarpa POPTR_0008s13960 N 0.838
Pm005924 Prunus mume Pm005924 N 0.838
PRUPE_ppa009765mg Prunus persica PRUPE_ppa009765mg N 0.835
29780.m001393 Ricinus communis 29780.m001393 N 0.901
SapurV1A.0015s0840 Salix purpurea SapurV1A.0015s0840 N 0.831
SapurV1A.0055s0040 Salix purpurea SapurV1A.0055s0040 N 0.809
PGSC0003DMG402029444 Solanum tuberosum PGSC0003DMG402029444 N 0.717
TCM_011212 Theobroma cacao TCM_011212 N 0.824
VIT_01s0011g06380 Vitis vinifera VIT_01s0011g06380 N 0.779