Pavir.J31488 (Panicum virgatum)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Pavir.J31488 T024889_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J31488.1.p BBR 1 342

Links

Other BBR family TFs
Other Panicum virgatum TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_009_00307 Aquilegia coerulea Aquca_009_00307 N
scaffold_403309.1 Arabidopsis lyrata scaffold_403309.1 N
Bostr.25993s0368 Boechera stricta Bostr.25993s0368 N
Bo4g021230 Brassica oleracea Bo4g021230 N
Bra004800 Brassica rapa Bra004800 N
PK11431.1 Cannabis sativa PK11431.1 N
Cagra.1517s0032 Capsella grandiflora Cagra.1517s0032 N
Carubv10023033m.g Capsella rubella Carubv10023033m.g N
evm.TU.supercontig_151.12 Carica papaya evm.TU.supercontig_151.12 N
Ca_10412 Cicer arietinum Ca_10412 N
Cla017427 Citrullus lanatus Cla017427 N
Ciclev10000930m.g Citrus clementina Ciclev10000930m.g N
orange1.1g048759m.g Citrus sinensis orange1.1g048759m.g N
Eucgr.F02687 Eucalyptus grandis Eucgr.F02687 N
Thhalv10001406m.g Eutrema salsugineum Thhalv10001406m.g N
Gorai.003G090600 Gossypium raimondii Gorai.003G090600 N
chr4.CM0042.1400.nc Lotus japonicus chr4.CM0042.1400.nc N
cassava22183.valid.m1 Manihot esculenta cassava22183.valid.m1 N
mgf008193m Mimulus guttatus mgf008193m N
POPTR_0013s12100 Populus trichocarpa POPTR_0013s12100 N
SapurV1A.0179s0360 Salix purpurea SapurV1A.0179s0360 N
SapurV1A.0287s0020 Salix purpurea SapurV1A.0287s0020 N
SapurV1A.0596s0020 Salix purpurea SapurV1A.0596s0020 N
TCM_001393 Theobroma cacao TCM_001393 N