CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf000829m
(
Mimulus guttatus
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
mgf000829m
T028113_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf000829m
BED ZF
17
68
SVVWNDFDRVKKGETFAAICRHCKRILSGSSTSGTSHLRNHLIRCRRRSNHD
Links
Other
BED ZF
family TFs
Other
Mimulus guttatus
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_039_00001
Aquilegia coerulea
Aquca_039_00001
N
0.705
Bostr.10273s0360
Boechera stricta
Bostr.10273s0360
N
0.795
Bo6g110620
Brassica oleracea
Bo6g110620
N
0.738
PK13949.1
Cannabis sativa
PK13949.1
N
0.773
Cagra.10840s0006
Capsella grandiflora
Cagra.10840s0006
N
0.795
Carubv10022346m.g
Capsella rubella
Carubv10022346m.g
N
0.795
Cucsa.185330
Cucumis sativus
Cucsa.185330
N
0.841
Eucgr.K01194
Eucalyptus grandis
Eucgr.K01194
N
0.864
Thhalv10018229m.g
Eutrema salsugineum
Thhalv10018229m.g
N
0.750
gene24495-v1.0-hybrid
Fragaria vesca
gene24495-v1.0-hybrid
N
0.738
GLYMA08G42321
Glycine max
GLYMA08G42321
N
0.795
GLYMA18G12556
Glycine max
GLYMA18G12556
N
0.795
Gorai.012G042700
Gossypium raimondii
Gorai.012G042700
N
0.884
cassava35563.valid.m1
Manihot esculenta
cassava35563.valid.m1
N
0.886
cassava21091.m1
Manihot esculenta
cassava21091.m1
N
0.860
Pm014562
Prunus mume
Pm014562
N
0.738
PRUPE_ppa002590mg
Prunus persica
PRUPE_ppa002590mg
N
0.738
Solyc10g007810.2
Solanum lycopersicum
Solyc10g007810.2
N
0.932
PGSC0003DMG400021240
Solanum tuberosum
PGSC0003DMG400021240
N
0.932
TCM_001836
Theobroma cacao
TCM_001836
N
0.884
VIT_12s0142g00390
Vitis vinifera
VIT_12s0142g00390
N
0.886