Gorai.004G107300 (Gossypium raimondii)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Gorai.004G107300 T028330_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G107300.1 BED ZF 37 88
Gorai.004G107300.2 BED ZF 37 88

Links

Other BED ZF family TFs
Other Gossypium raimondii TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I 0.000
scaffold_103100001.1 Arabidopsis lyrata scaffold_103100001.1 I 0.000
fgenesh2_kg.1__2057__AT1G18790.1 Arabidopsis lyrata fgenesh2_kg.1__2057__AT1G18790.1 I 0.000
fgenesh1_pg.C_scaffold_8002648 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002648 I 0.000
fgenesh1_pg.C_scaffold_2001738 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001738 I 0.000
fgenesh1_pg.C_scaffold_2000886 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000886 I 0.000
RKD1 Arabidopsis thaliana AT1G18790 I 0.000
RKD3 Arabidopsis thaliana AT5G66990 N 0.000
RKD2 Arabidopsis thaliana AT1G74480 D 0.000
Bostr.0568s0123 Boechera stricta Bostr.0568s0123 N 0.000
Bostr.3288s0094 Boechera stricta Bostr.3288s0094 I 0.000
Bo8g068090 Brassica oleracea Bo8g068090 I 0.000
Bo7g064180 Brassica oleracea Bo7g064180 I 0.000
Bra015907 Brassica rapa Bra015907 I 0.000
Bra016542 Brassica rapa Bra016542 I 0.000
Bra008153 Brassica rapa Bra008153 I 0.000
Bra012122 Brassica rapa Bra012122 I 0.000
Cagra.4153s0001 Capsella grandiflora Cagra.4153s0001 I 0.000
Cagra.2007s0003 Capsella grandiflora Cagra.2007s0003 N 0.000
Cagra.0402s0077 Capsella grandiflora Cagra.0402s0077 I 0.000
Carubv10021541m.g Capsella rubella Carubv10021541m.g I 0.000
Carubv10011133m.g Capsella rubella Carubv10011133m.g I 0.000
Carubv10027579m.g Capsella rubella Carubv10027579m.g N 0.000
evm.TU.supercontig_423.7 Carica papaya evm.TU.supercontig_423.7 I 0.000
Ca_13151 Cicer arietinum Ca_13151 I 0.000
Ca_27191 Cicer arietinum Ca_27191 I 0.000
Cla019404 Citrullus lanatus Cla019404 I 0.000
orange1.1g036926m.g Citrus sinensis orange1.1g036926m.g I 0.000
Genemark1.7281_g Coccomyxa subellipsoidea C169 Genemark1.7281_g I 0.000
Cucsa.197700 Cucumis sativus Cucsa.197700 I 0.000
Thhalv10019554m.g Eutrema salsugineum Thhalv10019554m.g I 0.000
Thhalv10005560m.g Eutrema salsugineum Thhalv10005560m.g N 0.000
gene26015-v1.0-hybrid Fragaria vesca gene26015-v1.0-hybrid I 0.000
GLYMA04G33516 Glycine max GLYMA04G33516 I 0.000
GLYMA05G01030 Glycine max GLYMA05G01030 I 0.000
GLYMA06G20881 Glycine max GLYMA06G20881 I 0.000
GLYMA17G10866 Glycine max GLYMA17G10866 I 0.000
Gorai.008G193400 Gossypium raimondii Gorai.008G193400 I 0.000
Gorai.006G266900 Gossypium raimondii Gorai.006G266900 I 0.000
MLOC_12609 Hordeum vulgare MLOC_12609 I 0.000
MLOC_59560 Hordeum vulgare MLOC_59560 I 0.000
Lus10019100.g Linum usitatissimum Lus10019100.g I 0.000
Lus10034456.g Linum usitatissimum Lus10034456.g I 0.000
chr4.CM0087.990.nc Lotus japonicus chr4.CM0087.990.nc I 0.000
MDP0000266172 Malus domestica MDP0000266172 I 0.000
MDP0000261199 Malus domestica MDP0000261199 I 0.000
cassava35166.m1 Manihot esculenta cassava35166.m1 I 0.000
MTR_3g435550 Medicago truncatula MTR_3g435550 I 0.000
mgf022310m Mimulus guttatus mgf022310m I 0.000
mg020279m Mimulus guttatus mg020279m I 0.000
GSMUA_AchrUn_randomG11290_001 Musa acuminata GSMUA_AchrUn_randomG11290_001 N 0.000
Pavir.Ea01492 Panicum virgatum Pavir.Ea01492 N 0.000
Pavir.Eb01347 Panicum virgatum Pavir.Eb01347 N 0.000
PDK_20s1383532g001 Phoenix dactylifera PDK_20s1383532g001 I 0.000
PDK_20s1788591g001 Phoenix dactylifera PDK_20s1788591g001 N 0.000
Pm024905 Prunus mume Pm024905 I 0.000
PRUPE_ppa023107mg Prunus persica PRUPE_ppa023107mg I 0.000
30138.m004071 Ricinus communis 30138.m004071 I 0.000
TCM_014009 Theobroma cacao TCM_014009 I 0.000
TRIUR3_19503 Triticum urartu TRIUR3_19503 I 0.000
VIT_17s0000g06250 Vitis vinifera VIT_17s0000g06250 I 0.000