ENSONIG00000008797 (Oreochromis niloticus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSONIG00000008797 T036223_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Clock
M01735_2.00 		Mus musculus
NNCAYRTGNN
NNCAYRTGNN		 PBM
Weirauch et al.(2014)
pTH5056 		0.914 0.902
CLOCK
M02789_2.00 		Homo sapiens
DACACGTGYH
DRCACGTGTH		 SELEX
Jolma et al.(2013)
CLOCK_1 		0.914 0.902
CLOCK
M04129_2.00 		Homo sapiens
NMCACGTGYN
NRCACGTGKN		 SELEX
Yin et al.(2017)
CLOCK_eDBD_HT-SELEX 		0.914 0.902
CLOCK
M08728_2.00 		Homo sapiens
DBBBCAYKTGNNHB
VDNNCAMRTGVVVH		 Misc
Kulakovskiy et al.(2013)
CLOCK_HUMAN.H11MO.0.C 		0.914 0.902
Clock
M08760_2.00 		Mus musculus
DBBBCAYKTGNNHB
VDNNCAMRTGVVVH		 Misc
Kulakovskiy et al.(2013)
CLOCK_MOUSE.H11MO.0.C 		0.914 0.902
Clock
M09473_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Clock_GSE39860 		0.914 0.902
CLOCK
M09849_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CLOCK_Q6 		0.914 0.902
CLOCK
M04130_2.00 		Homo sapiens
NRCRCRTGBH
DVCAYGYGYN		 SELEX
Yin et al.(2017)
CLOCK_eDBD_Methyl-HT-SELEX 		0.914 0.902
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000011060 bHLH 25 75
ENSONIP00000011061 bHLH 35 85

Links

Other bHLH family TFs
Other Oreochromis niloticus TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_31501 Aegilops tauschii F775_31501 I
AMTR_s00006p00265300 Amborella trichopoda AMTR_s00006p00265300 I
Aquca_019_00072 Aquilegia coerulea Aquca_019_00072 I
Aquca_009_01006 Aquilegia coerulea Aquca_009_01006 I
fgenesh1_pm.C_scaffold_3000820 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000820 I
AT3G10030 Arabidopsis thaliana AT3G10030 D
Bostr.22252s0062 Boechera stricta Bostr.22252s0062 I
BRADI5G08980 Brachypodium distachyon BRADI5G08980 I
Bo5g137800 Brassica oleracea Bo5g137800 I
Bra029812 Brassica rapa Bra029812 I
PK04914.1 Cannabis sativa PK04914.1 D
Cagra.4686s0014 Capsella grandiflora Cagra.4686s0014 I
Carubv10015256m.g Capsella rubella Carubv10015256m.g I
evm.TU.supercontig_128.55 Carica papaya evm.TU.supercontig_128.55 I
Ca_20148 Cicer arietinum Ca_20148 I
Cla018015 Citrullus lanatus Cla018015 I
Ciclev10011433m.g Citrus clementina Ciclev10011433m.g I
Cucsa.378670 Cucumis sativus Cucsa.378670 I
Thhalv10020471m.g Eutrema salsugineum Thhalv10020471m.g I
gene30101-v1.0-hybrid Fragaria vesca gene30101-v1.0-hybrid I
GLYMA10G34520 Glycine max GLYMA10G34520 I
GLYMA13G21371 Glycine max GLYMA13G21371 I
GLYMA20G33031 Glycine max GLYMA20G33031 I
GLYMA10G07490 Glycine max GLYMA10G07490 I
Gorai.007G371500 Gossypium raimondii Gorai.007G371500 I
MLOC_28975 Hordeum vulgare MLOC_28975 I
LPERR04G08300 Leersia perrieri LPERR04G08300 I
MDP0000415733 Malus domestica MDP0000415733 I
MDP0000201016 Malus domestica MDP0000201016 I
MDP0000399495 Malus domestica MDP0000399495 I
cassava30771.valid.m1 Manihot esculenta cassava30771.valid.m1 I
MTR_1g061600 Medicago truncatula MTR_1g061600 I
mgf008067m Mimulus guttatus mgf008067m I
GSMUA_Achr2G20220_001 Musa acuminata GSMUA_Achr2G20220_001 I
GSMUA_Achr6G13420_001 Musa acuminata GSMUA_Achr6G13420_001 I
OB04G18670 Oryza brachyantha OB04G18670 I
OGLUM04G11230 Oryza glumaepatula OGLUM04G11230 I
BGIOSGA016339 Oryza indica BGIOSGA016339 I
OMERI04G10080 Oryza meridionalis OMERI04G10080 I
ONIVA04G09510 Oryza nivara ONIVA04G09510 I
OPUNC04G09570 Oryza punctata OPUNC04G09570 I
Pavir.J13370 Panicum virgatum Pavir.J13370 I
Pavir.Gb01778 Panicum virgatum Pavir.Gb01778 I
POPTR_0006s11850 Populus trichocarpa POPTR_0006s11850 I
POPTR_0008s02730 Populus trichocarpa POPTR_0008s02730 I
POPTR_0010s23970 Populus trichocarpa POPTR_0010s23970 I
Pm026265 Prunus mume Pm026265 I
PRUPE_ppa004154mg Prunus persica PRUPE_ppa004154mg I
PRUPE_ppa022998mg Prunus persica PRUPE_ppa022998mg I
28077.m000081 Ricinus communis 28077.m000081 I
29815.m000504 Ricinus communis 29815.m000504 I
SapurV1A.0243s0300 Salix purpurea SapurV1A.0243s0300 I
SapurV1A.0226s0070 Salix purpurea SapurV1A.0226s0070 I
SapurV1A.0439s0120 Salix purpurea SapurV1A.0439s0120 I
SELMODRAFT_134056 Selaginella moellendorffii SELMODRAFT_134056 I
SELMODRAFT_130409 Selaginella moellendorffii SELMODRAFT_130409 I
Si009787m.g Setaria italica Si009787m.g I
Solyc09g008850.2 Solanum lycopersicum Solyc09g008850.2 I
PGSC0003DMG400002727 Solanum tuberosum PGSC0003DMG400002727 I
Sb06g015280 Sorghum bicolor Sb06g015280 I
TCM_043551 Theobroma cacao TCM_043551 I
TCM_022397 Theobroma cacao TCM_022397 I
Traes_2BL_83EDE2CBB Triticum aestivum Traes_2BL_83EDE2CBB I
Traes_2AL_246006E77 Triticum aestivum Traes_2AL_246006E77 I
TRIUR3_22240 Triticum urartu TRIUR3_22240 I
VIT_08s0007g04160 Vitis vinifera VIT_08s0007g04160 I
VIT_13s0074g00240 Vitis vinifera VIT_13s0074g00240 I
GRMZM2G002978 Zea mays GRMZM2G002978 I