Hes5 (Rattus norvegicus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSRNOG00000013850 T037205_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hes5
M01747_2.00 		Mus musculus
NVCRCGYGBN
NVCRCGYGBN		 PBM
Weirauch et al.(2014)
pTH5450 		0.914 1.000
HES5
M02809_2.00 		Homo sapiens
YGRCACGTGCCD
HGGCACGTGYCR		 SELEX
Jolma et al.(2013)
HES5_1 		0.914 1.000
HES5
M02810_2.00 		Homo sapiens
YGGCACGTGCCR
YGGCACGTGCCR		 SELEX
Jolma et al.(2013)
HES5_2 		0.914 1.000
HES5
M04216_2.00 		Homo sapiens
VRCACGTGCC
GGCACGTGYB		 SELEX
Yin et al.(2017)
HES5_eDBD_HT-SELEX 		0.914 1.000
HES5
M04217_2.00 		Homo sapiens
VRCACGTGCC
GGCACGTGYB		 SELEX
Yin et al.(2017)
HES5_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
HES5
M04218_2.00 		Homo sapiens
VSACRCKY
RMGYGTSB		 SELEX
Yin et al.(2017)
HES5_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000018769 bHLH 17 73

Links

Other bHLH family TFs
Other Rattus norvegicus TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00064p00208400 Amborella trichopoda AMTR_s00064p00208400 I
Aquca_020_00438 Aquilegia coerulea Aquca_020_00438 I
Al_scaffold_0008_2143 Arabidopsis lyrata Al_scaffold_0008_2143 I
AT5G56960 Arabidopsis thaliana AT5G56960 I
Bostr.26833s0565 Boechera stricta Bostr.26833s0565 I
Bo2g032920 Brassica oleracea Bo2g032920 I
Bra035639 Brassica rapa Bra035639 I
PK15505.1 Cannabis sativa PK15505.1 D
Cagra.1569s0004 Capsella grandiflora Cagra.1569s0004 I
Carubv10026331m.g Capsella rubella Carubv10026331m.g I
Cla017100 Citrullus lanatus Cla017100 I
Ciclev10007937m.g Citrus clementina Ciclev10007937m.g I
orange1.1g008967m.g Citrus sinensis orange1.1g008967m.g I
Cucsa.117060 Cucumis sativus Cucsa.117060 I
Eucgr.C03476 Eucalyptus grandis Eucgr.C03476 I
Thhalv10013360m.g Eutrema salsugineum Thhalv10013360m.g I
gene12658-v1.0-hybrid Fragaria vesca gene12658-v1.0-hybrid I
GLYMA15G18580 Glycine max GLYMA15G18580 I
GLYMA09G07391 Glycine max GLYMA09G07391 I
Gorai.001G012400 Gossypium raimondii Gorai.001G012400 I
LPERR05G05410 Leersia perrieri LPERR05G05410 I
LjT02N03.60.nd Lotus japonicus LjT02N03.60.nd I
MDP0000782908 Malus domestica MDP0000782908 I
MDP0000252899 Malus domestica MDP0000252899 I
MDP0000119495 Malus domestica MDP0000119495 I
cassava46879.m1 Manihot esculenta cassava46879.m1 I
cassava25701.m1 Manihot esculenta cassava25701.m1 I
mgf018190m Mimulus guttatus mgf018190m I
GSMUA_Achr6G00900_001 Musa acuminata GSMUA_Achr6G00900_001 I
GSMUA_Achr7G09080_001 Musa acuminata GSMUA_Achr7G09080_001 N
OBART05G06380 Oryza barthii OBART05G06380 I
OB05G15870 Oryza brachyantha OB05G15870 I
ORGLA05G0058200 Oryza glaberrima ORGLA05G0058200 I
OGLUM05G06690 Oryza glumaepatula OGLUM05G06690 I
BGIOSGA033976 Oryza indica BGIOSGA033976 I
ONIVA05G07120 Oryza nivara ONIVA05G07120 I
OPUNC05G05910 Oryza punctata OPUNC05G05910 I
ORUFI05G06870 Oryza rufipogon ORUFI05G06870 I
OS05G0199800 Oryza sativa OS05G0199800 I
Pavir.Ca00825 Panicum virgatum Pavir.Ca00825 I
Pavir.J01638 Panicum virgatum Pavir.J01638 I
PDK_20s1427741g002 Phoenix dactylifera PDK_20s1427741g002 I
POPTR_0006s15310 Populus trichocarpa POPTR_0006s15310 I
Pm027191 Prunus mume Pm027191 I
PRUPE_ppa020972mg Prunus persica PRUPE_ppa020972mg I
29912.m005337 Ricinus communis 29912.m005337 I
SapurV1A.0108s0270 Salix purpurea SapurV1A.0108s0270 I
Si024546m.g Setaria italica Si024546m.g I
Solyc07g039570.2 Solanum lycopersicum Solyc07g039570.2 I
PGSC0003DMG400022043 Solanum tuberosum PGSC0003DMG400022043 I
PGSC0003DMG400000335 Solanum tuberosum PGSC0003DMG400000335 I
TCM_037645 Theobroma cacao TCM_037645 I
GRMZM2G175480 Zea mays GRMZM2G175480 N