Afo_R007145 (Aptenodytes forsteri)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Afo_R007145 T046579_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tfap4
M01717_2.00 		Mus musculus
VHCABVYGB
VCRBVTGDB		 PBM
Weirauch et al.(2014)
pTH5067 		0.433 1.000
TFAP4
M02776_2.00 		Homo sapiens
AWCAGCTGWY
RWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_1 		0.433 1.000
TFAP4
M02777_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_2 		0.433 1.000
TFAP4
M04066_2.00 		Homo sapiens
VHCAKVTGDB
VHCABMTGDB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1 		0.433 1.000
TFAP4
M04067_2.00 		Homo sapiens
VWCAGCTGWB
VWCAGCTGWB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2 		0.433 1.000
TFAP4
M04070_2.00 		Homo sapiens
RHCAYVTGDB
VHCABRTGDY		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1 		0.433 1.000
TFAP4
M04071_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2 		0.433 1.000
TFAP4
M08712_2.00 		Homo sapiens
VMNCAGCTGR
YCAGCTGNKB		 Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A 		0.433 1.000
TFAP4
M09453_2.00 		Homo sapiens
NVHCAGCTGD
HCAGCTGDBN		 Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738 		0.433 1.000
TFAP4
M09802_2.00 		Homo sapiens
MNGNCHVCAGCTGDBBBW
WVVVHCAGCTGBDGNCNK		 Transfac
Matys et al.(2006)
V$AP4_01 		0.433 1.000
TFAP4
M09803_2.00 		Homo sapiens
NNSAGCTGHB
VDCAGCTSNN		 Transfac
Matys et al.(2006)
V$AP4_Q5 		0.433 1.000
TFAP4
M09804_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_01 		0.433 1.000
TFAP4
M09805_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_02 		0.433 1.000
TFAP4
M09806_2.00 		Homo sapiens
NVCAGCTGHB
VDCAGCTGBN		 Transfac
Matys et al.(2006)
V$AP4_Q6 		0.433 1.000
TFAP4
M04068_2.00 		Homo sapiens
DHCABMTGDN
NHCAKVTGDH		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1 		0.433 1.000
TFAP4
M04069_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2 		0.433 1.000
TFAP4
M04072_2.00 		Homo sapiens
VHCABVTGDB
VHCABVTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1 		0.433 1.000
TFAP4
M04073_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2 		0.433 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R007145 bHLH 1 31

Links

Other bHLH family TFs
Other Aptenodytes forsteri TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK28293.1 Cannabis sativa PK28293.1 N 0.000
evm.TU.supercontig_2.121 Carica papaya evm.TU.supercontig_2.121 N 0.000
Cla005911 Citrullus lanatus Cla005911 N 0.000
Ciclev10015354m.g Citrus clementina Ciclev10015354m.g N 0.000
orange1.1g022806m.g Citrus sinensis orange1.1g022806m.g N 0.000
Cucsa.026600 Cucumis sativus Cucsa.026600 N 0.000
Eucgr.G02067 Eucalyptus grandis Eucgr.G02067 N 0.000
gene00620-v1.0-hybrid Fragaria vesca gene00620-v1.0-hybrid N 0.000
GLYMA08G09780 Glycine max GLYMA08G09780 N 0.000
GLYMA05G26790 Glycine max GLYMA05G26790 N 0.000
Gorai.012G183100 Gossypium raimondii Gorai.012G183100 N 0.000
Gorai.005G154200 Gossypium raimondii Gorai.005G154200 N 0.000
Gorai.002G171200 Gossypium raimondii Gorai.002G171200 N 0.000
Lus10040427.g Linum usitatissimum Lus10040427.g N 0.000
Lus10023543.g Linum usitatissimum Lus10023543.g N 0.000
chr4.CM0387.290.nc Lotus japonicus chr4.CM0387.290.nc N 0.000
MDP0000320521 Malus domestica MDP0000320521 N 0.000
MDP0000826219 Malus domestica MDP0000826219 N 0.000
cassava39873.m1 Manihot esculenta cassava39873.m1 N 0.000
cassava18077.valid.m1 Manihot esculenta cassava18077.valid.m1 N 0.000
POPTR_0010s11180 Populus trichocarpa POPTR_0010s11180 N 0.000
POPTR_0008s13960 Populus trichocarpa POPTR_0008s13960 N 0.000
Pm005924 Prunus mume Pm005924 N 0.000
PRUPE_ppa009765mg Prunus persica PRUPE_ppa009765mg N 0.000
29780.m001393 Ricinus communis 29780.m001393 N 0.000
SapurV1A.0015s0840 Salix purpurea SapurV1A.0015s0840 N 0.000
SapurV1A.0055s0040 Salix purpurea SapurV1A.0055s0040 N 0.000
PGSC0003DMG402029444 Solanum tuberosum PGSC0003DMG402029444 N 0.000
TCM_011212 Theobroma cacao TCM_011212 N 0.000
VIT_01s0011g06380 Vitis vinifera VIT_01s0011g06380 N 0.000