ENSP00000256495-D1 (Bos grunniens)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 ENSP00000256495-D1 T047196_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.914 1.000
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.914 1.000
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.914 1.000
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.914 1.000
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.914 1.000
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.914 1.000
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.914 1.000
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.914 1.000
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.914 1.000
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.914 1.000
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.914 1.000
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.914 1.000
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.914 1.000
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.914 1.000
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.914 1.000
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.914 0.981
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.914 0.981
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.914 0.981
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.914 0.981
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.914 0.981
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.914 0.981
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000256495-D1 bHLH 54 108

Links

Other bHLH family TFs
Other Bos grunniens TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00006p00259200 Amborella trichopoda AMTR_s00006p00259200 I 0.000
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I 0.000
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.000
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.000
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I 0.000
Aquca_024_00067 Aquilegia coerulea Aquca_024_00067 N 0.000
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I 0.000
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.000
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.000
ENSP00000298299-D2 Bos grunniens ENSP00000298299-D2 I 0.000
BRADI4G32920 Brachypodium distachyon BRADI4G32920 I 0.000
Bo2g012800 Brassica oleracea Bo2g012800 I 0.000
Bo3g010620 Brassica oleracea Bo3g010620 I 0.000
Bo3g010750 Brassica oleracea Bo3g010750 I 0.000
Bo9g163740 Brassica oleracea Bo9g163740 I 0.000
Bra006324 Brassica rapa Bra006324 I 0.000
Bra008670 Brassica rapa Bra008670 I 0.000
Bra023540 Brassica rapa Bra023540 I 0.000
PK01815.1 Cannabis sativa PK01815.1 N 0.000
PK07533.1 Cannabis sativa PK07533.1 I 0.000
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.000
evm.TU.supercontig_129.74 Carica papaya evm.TU.supercontig_129.74 I 0.000
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.000
Cla005975 Citrullus lanatus Cla005975 I 0.000
Cla008074 Citrullus lanatus Cla008074 I 0.000
Cla014262 Citrullus lanatus Cla014262 N 0.000
Cla016748 Citrullus lanatus Cla016748 I 0.000
Cla016841 Citrullus lanatus Cla016841 I 0.000
Cla020641 Citrullus lanatus Cla020641 I 0.000
Ciclev10002731m.g Citrus clementina Ciclev10002731m.g N 0.000
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I 0.000
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.000
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.000
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.000
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.000
orange1.1g041765m.g Citrus sinensis orange1.1g041765m.g N 0.000
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I 0.000
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.000
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.000
Cucsa.103380 Cucumis sativus Cucsa.103380 N 0.000
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.000
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.000
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.000
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.000
Zfp422 Dipodomys ordii ENSDORG00000005689 I 0.000
Eucgr.G01645 Eucalyptus grandis Eucgr.G01645 N 0.000
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.000
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.000
Eucgr.L01789 Eucalyptus grandis Eucgr.L01789 N 0.000
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.000
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.000
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.000
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.000
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.000
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.000
GLYMA06G01240 Glycine max GLYMA06G01240 I 0.000
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.000
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.000
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.000
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.000
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.000
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I 0.000
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I 0.000
Gorai.008G085200 Gossypium raimondii Gorai.008G085200 I 0.000
LPERR08G15570 Leersia perrieri LPERR08G15570 I 0.000
LPERR09G10020 Leersia perrieri LPERR09G10020 I 0.000
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.000
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.000
Lus10019273.g Linum usitatissimum Lus10019273.g N 0.000
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.000
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.000
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.000
MDP0000183562 Malus domestica MDP0000183562 I 0.000
MDP0000205823 Malus domestica MDP0000205823 I 0.000
MDP0000239026 Malus domestica MDP0000239026 I 0.000
MDP0000261154 Malus domestica MDP0000261154 N 0.000
MDP0000738631 Malus domestica MDP0000738631 I 0.000
MDP0000863909 Malus domestica MDP0000863909 I 0.000
MDP0000891108 Malus domestica MDP0000891108 I 0.000
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.000
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.000
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.000
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.000
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.000
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.000
MTR_4g097440 Medicago truncatula MTR_4g097440 I 0.000
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.000
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.000
MTR_8g015250 Medicago truncatula MTR_8g015250 I 0.000
mgf003466m Mimulus guttatus mgf003466m I 0.000
mgf007535m Mimulus guttatus mgf007535m I 0.000
mgf013074m Mimulus guttatus mgf013074m I 0.000
mgf017392m Mimulus guttatus mgf017392m I 0.000
mgf018581m Mimulus guttatus mgf018581m I 0.000
mgf018661m Mimulus guttatus mgf018661m N 0.000
mgf021986m Mimulus guttatus mgf021986m I 0.000
ZNF22 Monodelphis domestica ENSMODG00000010011 I 0.000
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.000
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.000
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.000
GSMUA_Achr1G25340_001 Musa acuminata GSMUA_Achr1G25340_001 I 0.000
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I 0.000
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.000
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I 0.000
GSMUA_Achr9G14690_001 Musa acuminata GSMUA_Achr9G14690_001 I 0.000
Zfp422 Mus musculus ENSMUSG00000059878 I 0.000
OBART08G18720 Oryza barthii OBART08G18720 I 0.000
OBART09G13750 Oryza barthii OBART09G13750 I 0.000
OBART09G13760 Oryza barthii OBART09G13760 I 0.000
OB09G20300 Oryza brachyantha OB09G20300 I 0.000
ORGLA08G0162900 Oryza glaberrima ORGLA08G0162900 I 0.000
ORGLA09G0104900 Oryza glaberrima ORGLA09G0104900 I 0.000
OGLUM08G19690 Oryza glumaepatula OGLUM08G19690 I 0.000
OGLUM09G14340 Oryza glumaepatula OGLUM09G14340 I 0.000
BGIOSGA026766 Oryza indica BGIOSGA026766 I 0.000
BGIOSGA029595 Oryza indica BGIOSGA029595 I 0.000
OLONG_013604 Oryza longistaminata OLONG_013604 I 0.000
OMERI08G14760 Oryza meridionalis OMERI08G14760 I 0.000
ONIVA08G20730 Oryza nivara ONIVA08G20730 I 0.000
ONIVA09G14270 Oryza nivara ONIVA09G14270 I 0.000
OPUNC08G16670 Oryza punctata OPUNC08G16670 I 0.000
OPUNC09G12140 Oryza punctata OPUNC09G12140 I 0.000
OPUNC09G12240 Oryza punctata OPUNC09G12240 I 0.000
ORUFI08G08020 Oryza rufipogon ORUFI08G08020 I 0.000
ORUFI09G14730 Oryza rufipogon ORUFI09G14730 I 0.000
OS08G0487100 Oryza sativa OS08G0487100 I 0.000
OS09G0474000 Oryza sativa OS09G0474000 I 0.000
ENSOARG00000003699 Ovis aries ENSOARG00000003699 I 0.000
Pavir.Fa00602 Panicum virgatum Pavir.Fa00602 I 0.000
Pavir.Fb01824 Panicum virgatum Pavir.Fb01824 I 0.000
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I 0.000
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.000
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I 0.000
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.000
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.000
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.000
POPTR_0014s00790 Populus trichocarpa POPTR_0014s00790 N 0.000
Pm002353 Prunus mume Pm002353 I 0.000
Pm015434 Prunus mume Pm015434 I 0.000
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.000
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.000
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.000
Zfp422 Rattus norvegicus ENSRNOG00000013379 I 0.000
28976.m000155 Ricinus communis 28976.m000155 N 0.000
30138.m003866 Ricinus communis 30138.m003866 I 0.000
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.000
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.000
SapurV1A.0235s0220 Salix purpurea SapurV1A.0235s0220 N 0.000
SapurV1A.0396s0080 Salix purpurea SapurV1A.0396s0080 I 0.000
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.000
SapurV1A.0608s0130 Salix purpurea SapurV1A.0608s0130 N 0.000
Si014433m.g Setaria italica Si014433m.g I 0.000
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.000
Solyc02g084860.1 Solanum lycopersicum Solyc02g084860.1 I 0.000
Solyc02g092090.1 Solanum lycopersicum Solyc02g092090.1 I 0.000
Solyc03g043900.1 Solanum lycopersicum Solyc03g043900.1 N 0.000
Solyc03g046440.1 Solanum lycopersicum Solyc03g046440.1 I 0.000
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.000
PGSC0003DMG400003529 Solanum tuberosum PGSC0003DMG400003529 I 0.000
PGSC0003DMG400005476 Solanum tuberosum PGSC0003DMG400005476 N 0.000
PGSC0003DMG400007523 Solanum tuberosum PGSC0003DMG400007523 I 0.000
PGSC0003DMG400021431 Solanum tuberosum PGSC0003DMG400021431 I 0.000
Sb07g028900 Sorghum bicolor Sb07g028900 I 0.000
Sb07g028960 Sorghum bicolor Sb07g028960 I 0.000
TCM_000835 Theobroma cacao TCM_000835 I 0.000
Traes_5BL_C559EFC8A Triticum aestivum Traes_5BL_C559EFC8A I 0.000
Traes_5DL_591F8EFBD Triticum aestivum Traes_5DL_591F8EFBD I 0.000
ZNF22 Tupaia belangeri ENSTBEG00000005332 I 0.000
VIT_00s0541g00020 Vitis vinifera VIT_00s0541g00020 N 0.000
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.000
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.000
VIT_05s0077g01140 Vitis vinifera VIT_05s0077g01140 I 0.000
VIT_18s0001g13040 Vitis vinifera VIT_18s0001g13040 N 0.000
AC186606.4_FG003 Zea mays AC186606.4_FG003 I 0.000
GRMZM2G144480 Zea mays GRMZM2G144480 I 0.000