CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BATF3
(
Felis catus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSFCAG00000014614
T059697_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Batf3
M08826_2.00
Mus musculus
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN
Misc
Kulakovskiy et al.(2013)
BATF3_MOUSE.H11MO.0.A
0.853
0.844
BATF3
M02833_2.00
Homo sapiens
YGATGACGTCATCA
TGATGACGTCATCR
SELEX
Jolma et al.(2013)
BATF3_1
0.842
0.906
BATF3
M04268_2.00
Homo sapiens
BRTGACGTCABN
NVTGACGTCAYV
SELEX
Yin et al.(2017)
BATF3_eDBD_HT-SELEX
0.842
0.906
BATF3
M04270_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
BATF3_FL_HT-SELEX
0.842
0.906
BATF3
M04025_2.00
Homo sapiens
GRTGACGTCAYC
GRTGACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
BATF3.1
0.842
0.906
BATF3
M04026_2.00
Homo sapiens
GRTGACGTGGS
SCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
BATF3.2
0.842
0.906
BATF3
M08794_2.00
Homo sapiens
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN
Misc
Kulakovskiy et al.(2013)
BATF3_HUMAN.H11MO.0.B
0.842
0.906
BATF3
M09962_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF3_02
0.842
0.906
BATF3
M04269_2.00
Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN
SELEX
Yin et al.(2017)
BATF3_eDBD_Methyl-HT-SELEX
0.842
0.906
BATF3
M04271_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
BATF3_FL_Methyl-HT-SELEX
0.842
0.906
Batf
M08829_2.00
Mus musculus
NWSASTCAWHNNDDDANH
DNTHHHNNDWTGASTSWN
Misc
Kulakovskiy et al.(2013)
BATF_MOUSE.H11MO.0.A
0.807
0.594
Batf
M09495_2.00
Mus musculus
VTGASTCABH
DVTGASTCAB
Misc
Heinz et al.(2010)
Th17-BATF_GSE39756
0.807
0.594
BATF
M04307_2.00
Homo sapiens
NVVYGMCACN
NGTGKCRBBN
SELEX
Yin et al.(2017)
BATF_FL_HT-SELEX
0.796
0.578
BATF
M07821_2.00
Homo sapiens
TBASTCAWWNYDRRA
TYYHRNWWTGASTVA
ChIP-seq
Gerstein et al.(2012)
GM12878_BATF_HudsonAlpha
0.796
0.578
BATF
M08799_2.00
Homo sapiens
NWBASTCAWWHHRRRAVH
DBTYYYDDWWTGASTVWN
Misc
Kulakovskiy et al.(2013)
BATF_HUMAN.H11MO.0.A
0.796
0.578
BATF
M09971_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_01
0.796
0.578
BATF
M09972_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_02
0.796
0.578
BATF
M09973_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_03
0.796
0.578
BATF
M09974_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_04
0.796
0.578
BATF
M04308_2.00
Homo sapiens
NVVYGACACN
NGTGTCRBBN
SELEX
Yin et al.(2017)
BATF_FL_Methyl-HT-SELEX
0.796
0.578
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000013556
bZIP
9
81
EDDDRKVRRREKNRVAAQRSRKKQTQKADKLHEEYECLEQENTVLRREIGKLTAELQQLSEALKEHEKMCPLL
Links
Other
bZIP
family TFs
Other
Felis catus
TFs
118 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_52642
Aegilops tauschii
F775_52642
N
Al_scaffold_0004_1965
Arabidopsis lyrata
Al_scaffold_0004_1965
N
fgenesh1_pm.C_scaffold_1002485
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1002485
N
BHLH52
Arabidopsis thaliana
AT1G30670
N
BHLH53
Arabidopsis thaliana
AT2G34820
N
Bostr.15697s0367
Boechera stricta
Bostr.15697s0367
N
Bostr.23794s0621
Boechera stricta
Bostr.23794s0621
N
BRADI4G29370
Brachypodium distachyon
BRADI4G29370
N
Bo4g182930
Brassica oleracea
Bo4g182930
N
Bo3g028090
Brassica oleracea
Bo3g028090
N
Bo4g039270
Brassica oleracea
Bo4g039270
N
Bra005389
Brassica rapa
Bra005389
N
Bra021933
Brassica rapa
Bra021933
N
Bra022993
Brassica rapa
Bra022993
N
Cagra.1508s0136
Capsella grandiflora
Cagra.1508s0136
N
Carubv10011063m.g
Capsella rubella
Carubv10011063m.g
N
evm.TU.supercontig_489.6
Carica papaya
evm.TU.supercontig_489.6
N
evm.TU.supercontig_489.5
Carica papaya
evm.TU.supercontig_489.5
N
Ca_13610
Cicer arietinum
Ca_13610
N
Ca_13608
Cicer arietinum
Ca_13608
N
Ciclev10017579m.g
Citrus clementina
Ciclev10017579m.g
N
orange1.1g041370m.g
Citrus sinensis
orange1.1g041370m.g
N
Eucgr.D01630
Eucalyptus grandis
Eucgr.D01630
N
Thhalv10017751m.g
Eutrema salsugineum
Thhalv10017751m.g
N
gene20146-v1.0-hybrid
Fragaria vesca
gene20146-v1.0-hybrid
N
gene18542-v1.0-hybrid
Fragaria vesca
gene18542-v1.0-hybrid
N
GLYMA15G41400
Glycine max
GLYMA15G41400
N
Lus10038432.g
Linum usitatissimum
Lus10038432.g
N
Lus10005451.g
Linum usitatissimum
Lus10005451.g
N
MDP0000791364
Malus domestica
MDP0000791364
N
MDP0000280921
Malus domestica
MDP0000280921
N
MDP0000209483
Malus domestica
MDP0000209483
N
cassava27522.m1
Manihot esculenta
cassava27522.m1
N
MTR_1g060700
Medicago truncatula
MTR_1g060700
N
MTR_2g067000
Medicago truncatula
MTR_2g067000
N
GSMUA_Achr11G16900_001
Musa acuminata
GSMUA_Achr11G16900_001
N
Pavir.Ca01783
Panicum virgatum
Pavir.Ca01783
N
Pavir.Ca01784
Panicum virgatum
Pavir.Ca01784
N
Pavir.Ia04589
Panicum virgatum
Pavir.Ia04589
N
Pavir.J05526
Panicum virgatum
Pavir.J05526
N
POPTR_0011s16100
Populus trichocarpa
POPTR_0011s16100
N
POPTR_0001s46530
Populus trichocarpa
POPTR_0001s46530
N
Pm010610
Prunus mume
Pm010610
N
PRUPE_ppa017597mg
Prunus persica
PRUPE_ppa017597mg
N
SapurV1A.0602s0120
Salix purpurea
SapurV1A.0602s0120
N
SapurV1A.0527s0040
Salix purpurea
SapurV1A.0527s0040
N
Si038598m.g
Setaria italica
Si038598m.g
N
Solyc08g075090.2
Solanum lycopersicum
Solyc08g075090.2
N
Solyc08g075110.1
Solanum lycopersicum
Solyc08g075110.1
N
Sb01g048400
Sorghum bicolor
Sb01g048400
N
TCM_033386
Theobroma cacao
TCM_033386
N
Traes_5BL_B55F708EC
Triticum aestivum
Traes_5BL_B55F708EC
N
Traes_5DL_84C86F76D
Triticum aestivum
Traes_5DL_84C86F76D
N
VIT_10s0092g00030
Vitis vinifera
VIT_10s0092g00030
N
GRMZM2G137374
Zea mays
GRMZM2G137374
N