Cmyd_10002048 (Chelonia mydas)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cmyd_10002048 T070065_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Fosl2
M01809_2.00 		Mus musculus
GATGACKH
DMGTCATC		 PBM
Weirauch et al.(2014)
pTH5108 		0.920 0.852
Fosl2
M08828_2.00 		Mus musculus
NVTGACTCABN
NVTGAGTCABN		 Misc
Kulakovskiy et al.(2013)
FOSL2_MOUSE.H11MO.0.A 		0.920 0.852
Fosl2
M09494_2.00 		Mus musculus
NNVTGASTCABN
NVTGASTCABNN		 Misc
Heinz et al.(2010)
3T3L1-Fosl2_GSE56872 		0.920 0.852
FOSB
M04272_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
FOSB_eDBD_HT-SELEX 		0.889 0.984
FOSB
M08795_2.00 		Homo sapiens
VTGACTCAB
VTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
FOSB_HUMAN.H11MO.0.A 		0.889 0.984
Fosb
M08814_2.00 		Mus musculus
VTGACTCAB
VTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
FOSB_MOUSE.H11MO.0.A 		0.889 0.984
FOSB
M04273_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
FOSB_eDBD_Methyl-HT-SELEX 		0.889 0.984
FOS
M04327_2.00 		Homo sapiens
BRTGACGTCAYV
BRTGACGTCAYV		 SELEX
Yin et al.(2017)
FOS_eDBD_HT-SELEX 		0.888 0.820
FOS
M08069_2.00 		Homo sapiens
DVTGASTCATN
NATGASTCABH		 ChIP-seq
Mathelier et al.(2014)
MA0476.1 		0.888 0.820
FOS
M07826_2.00 		Homo sapiens
NATGASTCABDBN
NVHVTGASTCATN		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CFOS_Stanford 		0.888 0.820
FOS
M07827_2.00 		Homo sapiens
MTGASTCAYHN
NDRTGASTCAK		 ChIP-seq
Gerstein et al.(2012)
HUVEC_CFOS_UCD 		0.888 0.820
FOS
M07828_2.00 		Homo sapiens
BDRTGASTCAYNBHB
VDVNRTGASTCAYHV		 ChIP-seq
Gerstein et al.(2012)
K562_CFOS_UChicago 		0.888 0.820
FOS
M08802_2.00 		Homo sapiens
VTGACTCAB
VTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
FOS_HUMAN.H11MO.0.A 		0.888 0.820
Fos
M08819_2.00 		Mus musculus
NRTGACTCAYNN
NNRTGAGTCAYN		 Misc
Kulakovskiy et al.(2013)
FOS_MOUSE.H11MO.0.A 		0.888 0.820
FOS
M09988_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CFOS_Q4 		0.888 0.820
FOS
M09989_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CFOS_Q6 		0.888 0.820
FOS
M09990_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOS_02 		0.888 0.820
FOS
M09991_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOS_03 		0.888 0.820
FOS
M04328_2.00 		Homo sapiens
VATGACRTCAYM
KRTGAYGTCATB		 SELEX
Yin et al.(2017)
FOS_eDBD_Methyl-HT-SELEX 		0.888 0.820
Fosl1
M01805_2.00 		Mus musculus
NNRTGACKYMN
NKRMGTCAYNN		 PBM
Weirauch et al.(2014)
pTH5077 		0.830 0.820
FOSL1
M04333_2.00 		Homo sapiens
NRTGAWTCAYN
NRTGAWTCAYN		 SELEX
Yin et al.(2017)
FOSL1_FL_HT-SELEX_1 		0.830 0.820
FOSL1
M04334_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
FOSL1_FL_HT-SELEX_2 		0.830 0.820
FOSL1
M04335_2.00 		Homo sapiens
DRTGAYRCR
YGYRTCAYH		 SELEX
Yin et al.(2017)
FOSL1_FL_HT-SELEX_3 		0.830 0.820
FOSL1
M04035_2.00 		Homo sapiens
RTGACGTCAY
RTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
FOSL1.1 		0.830 0.820
FOSL1
M04036_2.00 		Homo sapiens
GTCAYCRRTGAC
GTCAYYGRTGAC		 SELEX
Rodriguez-Martinez et al.(2017)
FOSL1.2 		0.830 0.820
FOSL1
M08071_2.00 		Homo sapiens
DRTGASTCAKV
BMTGASTCAYH		 ChIP-seq
Mathelier et al.(2014)
MA0477.1 		0.830 0.820
FOSL1
M07833_2.00 		Homo sapiens
NDRTGASTCAB
VTGASTCAYHN		 ChIP-seq
Gerstein et al.(2012)
K562_FOSL1_HudsonAlpha 		0.830 0.820
FOSL1
M08805_2.00 		Homo sapiens
NVTGACTCABNN
NNVTGAGTCABN		 Misc
Kulakovskiy et al.(2013)
FOSL1_HUMAN.H11MO.0.A 		0.830 0.820
Fosl1
M08821_2.00 		Mus musculus
NVTGACTCABNN
NNVTGAGTCABN		 Misc
Kulakovskiy et al.(2013)
FOSL1_MOUSE.H11MO.0.A 		0.830 0.820
FOSL1
M09490_2.00 		Homo sapiens
NNVTGASTCABN
NVTGASTCABNN		 Misc
Heinz et al.(2010)
BT549-Fra1_GSE46166 		0.830 0.820
FOSL1
M10000_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOSL1_01 		0.830 0.820
FOSL1
M10001_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FRA1_Q5 		0.830 0.820
FOSL1
M10002_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FRA1_Q6_01 		0.830 0.820
FOSL1
M10003_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FRA1_Q6 		0.830 0.820
FOSL1
M04336_2.00 		Homo sapiens
BRTGASTCATV
BATGASTCAYV		 SELEX
Yin et al.(2017)
FOSL1_FL_Methyl-HT-SELEX_1 		0.830 0.820
FOSL1
M04337_2.00 		Homo sapiens
NRTSACGTCAYN
NRTGACGTSAYN		 SELEX
Yin et al.(2017)
FOSL1_FL_Methyl-HT-SELEX_2 		0.830 0.820
FOSL1
M04338_2.00 		Homo sapiens
RATGAYRCR
YGYRTCATY		 SELEX
Yin et al.(2017)
FOSL1_FL_Methyl-HT-SELEX_3 		0.830 0.820
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10002048 bZIP 102 162

Links

Other bZIP family TFs
Other Chelonia mydas TFs

268 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_038_00045 Aquilegia coerulea Aquca_038_00045 N
scaffold_200168.1 Arabidopsis lyrata scaffold_200168.1 N
AT1G63490 Arabidopsis thaliana AT1G63490 N
Bostr.9600s0015 Boechera stricta Bostr.9600s0015 N
BRADI1G29247 Brachypodium distachyon BRADI1G29247 N
Bo9g029100 Brassica oleracea Bo9g029100 N
PK05702.1 Cannabis sativa PK05702.1 N
Cla011637 Citrullus lanatus Cla011637 N
orange1.1g000212m.g Citrus sinensis orange1.1g000212m.g N
Eucgr.D01851 Eucalyptus grandis Eucgr.D01851 N
Thhalv10023217m.g Eutrema salsugineum Thhalv10023217m.g N
gene32474-v1.0-hybrid Fragaria vesca gene32474-v1.0-hybrid N
GLYMA11G02580 Glycine max GLYMA11G02580 N
GLYMA01G42890 Glycine max GLYMA01G42890 N
Gorai.004G211700 Gossypium raimondii Gorai.004G211700 N
Lus10008495.g Linum usitatissimum Lus10008495.g N
chr2.CM0304.950.nc Lotus japonicus chr2.CM0304.950.nc N
MDP0000158904 Malus domestica MDP0000158904 N
MDP0000162827 Malus domestica MDP0000162827 N
MDP0000286412 Malus domestica MDP0000286412 N
MDP0000287313 Malus domestica MDP0000287313 N
cassava14944.m1 Manihot esculenta cassava14944.m1 N
MTR_5g010300 Medicago truncatula MTR_5g010300 N
mgf018831m Mimulus guttatus mgf018831m N
PDK_20s1401711g002 Phoenix dactylifera PDK_20s1401711g002 N
Pm023825 Prunus mume Pm023825 N
30190.m011218 Ricinus communis 30190.m011218 N
Solyc08g081000.2 Solanum lycopersicum Solyc08g081000.2 N
Sb10g031260 Sorghum bicolor Sb10g031260 N
TCM_016246 Theobroma cacao TCM_016246 N
GRMZM2G466292 Zea mays GRMZM2G466292 N