ENSGMOG00000006103 (Gadus morhua)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGMOG00000006103 T096755_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Sall1
M10342_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SALL1_04 		0.815 0.973
Sall1
M10343_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SALL1_05 		0.815 0.973
Sall1
M10344_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SALL1_06 		0.815 0.973
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000006464 C2H2 ZF 440 462
ENSGMOP00000006464 C2H2 ZF 468 490
ENSGMOP00000006464 C2H2 ZF 717 739
ENSGMOP00000006464 C2H2 ZF 749 771
ENSGMOP00000006464 C2H2 ZF 990 1012
ENSGMOP00000006464 C2H2 ZF 1018 1040
ENSGMOP00000006464 C2H2 ZF 1117 1139
ENSGMOP00000006464 C2H2 ZF 1145 1167

Links

Other C2H2 ZF family TFs
Other Gadus morhua TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VRN1 Arabidopsis lyrata fgenesh2_kg.3__2116__AT3G18990.1 I 0.000
VRN1 Arabidopsis thaliana AT3G18990 D 0.000
Bostr.19424s0762 Boechera stricta Bostr.19424s0762 I 0.000
Bo1g115980 Brassica oleracea Bo1g115980 I 0.000
Bo3g071890 Brassica oleracea Bo3g071890 I 0.000
Bo5g116790 Brassica oleracea Bo5g116790 I 0.000
Bra037544 Brassica rapa Bra037544 I 0.000
PK10791.1 Cannabis sativa PK10791.1 I 0.000
Cagra.5105s0003 Capsella grandiflora Cagra.5105s0003 I 0.000
Carubv10015637m.g Capsella rubella Carubv10015637m.g I 0.000
evm.TU.supercontig_62.76 Carica papaya evm.TU.supercontig_62.76 I 0.000
Ciclev10028642m.g Citrus clementina Ciclev10028642m.g I 0.000
orange1.1g016655m.g Citrus sinensis orange1.1g016655m.g I 0.000
Thhalv10021075m.g Eutrema salsugineum Thhalv10021075m.g I 0.000
gene31955-v1.0-hybrid Fragaria vesca gene31955-v1.0-hybrid I 0.000
Gorai.013G040000 Gossypium raimondii Gorai.013G040000 I 0.000
Gorai.002G006500 Gossypium raimondii Gorai.002G006500 I 0.000
Gorai.005G240900 Gossypium raimondii Gorai.005G240900 I 0.000
Gorai.012G150900 Gossypium raimondii Gorai.012G150900 I 0.000
MDP0000555456 Malus domestica MDP0000555456 N 0.000
cassava29880.valid.m1 Manihot esculenta cassava29880.valid.m1 I 0.000
POPTR_0004s15400 Populus trichocarpa POPTR_0004s15400 I 0.000
POPTR_0009s11170 Populus trichocarpa POPTR_0009s11170 I 0.000
Pm021537 Prunus mume Pm021537 N 0.000
PRUPE_ppa006275mg Prunus persica PRUPE_ppa006275mg I 0.000
29851.m002498 Ricinus communis 29851.m002498 I 0.000
SapurV1A.0090s0340 Salix purpurea SapurV1A.0090s0340 I 0.000
SapurV1A.0979s0040 Salix purpurea SapurV1A.0979s0040 I 0.000
SapurV1A.2089s0010 Salix purpurea SapurV1A.2089s0010 I 0.000
TCM_006971 Theobroma cacao TCM_006971 I 0.000