ENSONIG00000018855 (Oreochromis niloticus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSONIG00000018855 T104308_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.815 0.939
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.815 0.939
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.815 0.939
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.811 0.921
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.811 0.921
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000023743 C2H2 ZF 412 433
ENSONIP00000023743 C2H2 ZF 439 461
ENSONIP00000023743 C2H2 ZF 753 775
ENSONIP00000023743 C2H2 ZF 781 803
ENSONIP00000023743 C2H2 ZF 811 834

Links

Other C2H2 ZF family TFs
Other Oreochromis niloticus TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_005_00168 Aquilegia coerulea Aquca_005_00168 N 0.000
PK29014.1 Cannabis sativa PK29014.1 N 0.000
PK27925.1 Cannabis sativa PK27925.1 N 0.000
evm.TU.supercontig_195.14 Carica papaya evm.TU.supercontig_195.14 N 0.000
evm.TU.supercontig_104.98 Carica papaya evm.TU.supercontig_104.98 N 0.000
Cla018692 Citrullus lanatus Cla018692 N 0.000
Cla018691 Citrullus lanatus Cla018691 N 0.000
Ciclev10012468m.g Citrus clementina Ciclev10012468m.g N 0.000
Ciclev10029032m.g Citrus clementina Ciclev10029032m.g N 0.000
orange1.1g039532m.g Citrus sinensis orange1.1g039532m.g N 0.000
orange1.1g023996m.g Citrus sinensis orange1.1g023996m.g N 0.000
Cucsa.083530 Cucumis sativus Cucsa.083530 N 0.000
Eucgr.A02635 Eucalyptus grandis Eucgr.A02635 N 0.000
Eucgr.A02636 Eucalyptus grandis Eucgr.A02636 N 0.000
Eucgr.A02637 Eucalyptus grandis Eucgr.A02637 N 0.000
Eucgr.A02638 Eucalyptus grandis Eucgr.A02638 N 0.000
Eucgr.A02639 Eucalyptus grandis Eucgr.A02639 N 0.000
gene15644-v1.0-hybrid Fragaria vesca gene15644-v1.0-hybrid N 0.000
GLYMA19G38211 Glycine max GLYMA19G38211 N 0.000
GLYMA03G35570 Glycine max GLYMA03G35570 N 0.000
Gorai.009G399900 Gossypium raimondii Gorai.009G399900 N 0.000
Gorai.002G238300 Gossypium raimondii Gorai.002G238300 N 0.000
MDP0000759504 Malus domestica MDP0000759504 N 0.000
MDP0000506233 Malus domestica MDP0000506233 N 0.000
MDP0000252746 Malus domestica MDP0000252746 N 0.000
MDP0000252435 Malus domestica MDP0000252435 N 0.000
MDP0000205938 Malus domestica MDP0000205938 N 0.000
MDP0000130797 Malus domestica MDP0000130797 N 0.000
cassava14235.m1 Manihot esculenta cassava14235.m1 N 0.000
cassava13394.valid.m1 Manihot esculenta cassava13394.valid.m1 N 0.000
cassava15680.m1 Manihot esculenta cassava15680.m1 N 0.000
cassava15688.m1 Manihot esculenta cassava15688.m1 N 0.000
cassava19207.valid.m1 Manihot esculenta cassava19207.valid.m1 N 0.000
cassava3989.m1 Manihot esculenta cassava3989.m1 N 0.000
cassava32867.m1 Manihot esculenta cassava32867.m1 N 0.000
mgf020234m Mimulus guttatus mgf020234m N 0.000
GSMUA_Achr6G19400_001 Musa acuminata GSMUA_Achr6G19400_001 N 0.000
GSMUA_Achr9G29750_001 Musa acuminata GSMUA_Achr9G29750_001 N 0.000
POPTR_0016s07690 Populus trichocarpa POPTR_0016s07690 N 0.000
POPTR_0016s07680 Populus trichocarpa POPTR_0016s07680 N 0.000
POPTR_0006s22580 Populus trichocarpa POPTR_0006s22580 N 0.000
Pm001403 Prunus mume Pm001403 N 0.000
PRUPE_ppa010337mg Prunus persica PRUPE_ppa010337mg N 0.000
30032.m000479 Ricinus communis 30032.m000479 N 0.000
28629.m000575 Ricinus communis 28629.m000575 N 0.000
SapurV1A.0630s0010 Salix purpurea SapurV1A.0630s0010 N 0.000
SapurV1A.0768s0010 Salix purpurea SapurV1A.0768s0010 N 0.000
SapurV1A.0974s0010 Salix purpurea SapurV1A.0974s0010 N 0.000
Solyc09g010160.1 Solanum lycopersicum Solyc09g010160.1 N 0.000
Solyc11g068620.1 Solanum lycopersicum Solyc11g068620.1 N 0.000
PGSC0003DMG400026332 Solanum tuberosum PGSC0003DMG400026332 N 0.000
TCM_022676 Theobroma cacao TCM_022676 N 0.000
TCM_022690 Theobroma cacao TCM_022690 N 0.000
VIT_08s0007g02940 Vitis vinifera VIT_08s0007g02940 N 0.000