NCAS_0B04660 (Naumovozyma castellii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 NCAS_0B04660 T123989_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CMR3
M00042_2.00 		Saccharomyces cerevisiae
HGTARATCN
NGATYTACD		 PBM
Badis et al.(2008)
YPR013C_2104 		0.774 0.870
CMR3
M01539_2.00 		Saccharomyces cerevisiae
NGATYDRCVN
NBGYHRATCN		 PBM
Zhu et al.(2009)
Ypr013c 		0.774 0.870
CMR3
M07471_2.00 		Saccharomyces cerevisiae
NGATYKRCR
YGYMRATCN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0434.1 		0.774 0.870
CMR3
M08545_2.00 		Saccharomyces cerevisiae
NNNRVYGTARATCMYDNNNN
NNNNHRKGATYTACRBYNNN		 Misc
DeBoer et al.(2011)
YPR013C_859 		0.774 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCC68550 C2H2 ZF 195 217
CCC68550 C2H2 ZF 223 247

Links

Other C2H2 ZF family TFs
Other Naumovozyma castellii TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VRN1 Arabidopsis lyrata fgenesh2_kg.3__2116__AT3G18990.1 I
VRN1 Arabidopsis thaliana AT3G18990 D
Bostr.19424s0762 Boechera stricta Bostr.19424s0762 I
Bo1g115980 Brassica oleracea Bo1g115980 I
Bo5g116790 Brassica oleracea Bo5g116790 I
Bra037544 Brassica rapa Bra037544 I
PK10791.1 Cannabis sativa PK10791.1 I
Cagra.5105s0003 Capsella grandiflora Cagra.5105s0003 I
Carubv10015637m.g Capsella rubella Carubv10015637m.g I
Ciclev10028642m.g Citrus clementina Ciclev10028642m.g I
orange1.1g016655m.g Citrus sinensis orange1.1g016655m.g I
Thhalv10021075m.g Eutrema salsugineum Thhalv10021075m.g I
gene31955-v1.0-hybrid Fragaria vesca gene31955-v1.0-hybrid I
Gorai.002G006500 Gossypium raimondii Gorai.002G006500 I
Gorai.005G240900 Gossypium raimondii Gorai.005G240900 I
Gorai.012G150900 Gossypium raimondii Gorai.012G150900 I
Gorai.013G040000 Gossypium raimondii Gorai.013G040000 I
Lus10012041.g Linum usitatissimum Lus10012041.g N
Lus10027940.g Linum usitatissimum Lus10027940.g N
chr2.CM0308.470.nd Lotus japonicus chr2.CM0308.470.nd I
chr2.CM0262.200.nc Lotus japonicus chr2.CM0262.200.nc I
MDP0000238744 Malus domestica MDP0000238744 N
cassava29880.valid.m1 Manihot esculenta cassava29880.valid.m1 I
cassava29879.valid.m1 Manihot esculenta cassava29879.valid.m1 N
POPTR_0004s15400 Populus trichocarpa POPTR_0004s15400 I
PRUPE_ppa006275mg Prunus persica PRUPE_ppa006275mg I
29851.m002498 Ricinus communis 29851.m002498 I
SapurV1A.0090s0340 Salix purpurea SapurV1A.0090s0340 I
SapurV1A.0979s0040 Salix purpurea SapurV1A.0979s0040 I
SapurV1A.2089s0010 Salix purpurea SapurV1A.2089s0010 I
TCM_006971 Theobroma cacao TCM_006971 I