SELMODRAFT_450828 (Selaginella moellendorffii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SELMODRAFT_450828 T128495_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFP5
M01851_2.00 		Arabidopsis thaliana
DSWTNNNN
NNNNAWSH		 PBM
Weirauch et al.(2014)
pTH7539 		0.780 0.609
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ06956 C2H2 ZF 39 61

Links

Other C2H2 ZF family TFs
Other Selaginella moellendorffii TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_22212 Aegilops tauschii F775_22212 I
AMTR_s00096p00076220 Amborella trichopoda AMTR_s00096p00076220 I
fgenesh2_kg.277__1__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.277__1__AT5G58850.1 I
fgenesh2_kg.3__2684__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.3__2684__AT5G58850.1 I
MYB98 Arabidopsis lyrata scaffold_702543.1 I
Bostr.30275s0352 Boechera stricta Bostr.30275s0352 I
Bo1g019910 Brassica oleracea Bo1g019910 I
Bo2g028290 Brassica oleracea Bo2g028290 I
Bo3g018490 Brassica oleracea Bo3g018490 I
Bo3g157300 Brassica oleracea Bo3g157300 I
Bo7g106240 Brassica oleracea Bo7g106240 I
Bra006744 Brassica rapa Bra006744 I
Bra012579 Brassica rapa Bra012579 I
Bra013346 Brassica rapa Bra013346 I
Bra020346 Brassica rapa Bra020346 I
Bra020992 Brassica rapa Bra020992 I
Bra025299 Brassica rapa Bra025299 I
Cagra.0891s0081 Capsella grandiflora Cagra.0891s0081 I
Cagra.4306s0015 Capsella grandiflora Cagra.4306s0015 I
Carubv10006734m.g Capsella rubella Carubv10006734m.g I
Carubv10028458m.g Capsella rubella Carubv10028458m.g I
evm.TU.supercontig_76.38 Carica papaya evm.TU.supercontig_76.38 I
Ca_07482 Cicer arietinum Ca_07482 I
Ca_17087 Cicer arietinum Ca_17087 I
Ca_17294 Cicer arietinum Ca_17294 I
Ca_19427 Cicer arietinum Ca_19427 I
Cla019490 Citrullus lanatus Cla019490 I
Ciclev10024427m.g Citrus clementina Ciclev10024427m.g I
orange1.1g046859m.g Citrus sinensis orange1.1g046859m.g I
Cucsa.196850 Cucumis sativus Cucsa.196850 I
Eucgr.B00300 Eucalyptus grandis Eucgr.B00300 I
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I
Thhalv10016057m.g Eutrema salsugineum Thhalv10016057m.g I
Thhalv10026824m.g Eutrema salsugineum Thhalv10026824m.g I
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I
GLYMA05G02300 Glycine max GLYMA05G02300 I
GLYMA06G19280 Glycine max GLYMA06G19280 I
GLYMA16G07927 Glycine max GLYMA16G07927 I
GLYMA19G13923 Glycine max GLYMA19G13923 I
Gorai.001G263600 Gossypium raimondii Gorai.001G263600 I
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I
LPERR06G03780 Leersia perrieri LPERR06G03780 I
LPERR12G04190 Leersia perrieri LPERR12G04190 I
Lus10002384.g Linum usitatissimum Lus10002384.g I
Lus10027695.g Linum usitatissimum Lus10027695.g I
Lus10039966.g Linum usitatissimum Lus10039966.g I
Lus10042111.g Linum usitatissimum Lus10042111.g I
MDP0000215359 Malus domestica MDP0000215359 I
cassava19706.m1 Manihot esculenta cassava19706.m1 I
cassava33974.m1 Manihot esculenta cassava33974.m1 I
MTR_3g077650 Medicago truncatula MTR_3g077650 I
MTR_4g088015 Medicago truncatula MTR_4g088015 I
MTR_5g049190 Medicago truncatula MTR_5g049190 I
MTR_7g037260 Medicago truncatula MTR_7g037260 I
mg025334m Mimulus guttatus mg025334m I
mgf023372m Mimulus guttatus mgf023372m I
mgf024290m Mimulus guttatus mgf024290m I
GSMUA_Achr3G19490_001 Musa acuminata GSMUA_Achr3G19490_001 I
GSMUA_Achr6G06490_001 Musa acuminata GSMUA_Achr6G06490_001 I
OBART06G04170 Oryza barthii OBART06G04170 I
OBART12G04480 Oryza barthii OBART12G04480 I
OBART12G04500 Oryza barthii OBART12G04500 I
OB06G13860 Oryza brachyantha OB06G13860 I
OB12G14410 Oryza brachyantha OB12G14410 I
ORGLA06G0038500 Oryza glaberrima ORGLA06G0038500 I
ORGLA12G0042300 Oryza glaberrima ORGLA12G0042300 I
OGLUM06G04280 Oryza glumaepatula OGLUM06G04280 I
OGLUM12G05330 Oryza glumaepatula OGLUM12G05330 I
BGIOSGA022369 Oryza indica BGIOSGA022369 I
BGIOSGA036541 Oryza indica BGIOSGA036541 I
OLONG_008158 Oryza longistaminata OLONG_008158 I
OLONG_010000 Oryza longistaminata OLONG_010000 I
OMERI06G04840 Oryza meridionalis OMERI06G04840 I
OMERI12G02760 Oryza meridionalis OMERI12G02760 I
ONIVA06G05390 Oryza nivara ONIVA06G05390 I
ONIVA12G04220 Oryza nivara ONIVA12G04220 I
OPUNC06G03990 Oryza punctata OPUNC06G03990 I
OPUNC12G04510 Oryza punctata OPUNC12G04510 I
ORUFI06G04170 Oryza rufipogon ORUFI06G04170 I
ORUFI12G05180 Oryza rufipogon ORUFI12G05180 I
OS06G0162700 Oryza sativa OS06G0162700 I
Pavir.J02497 Panicum virgatum Pavir.J02497 I
Pavir.J02718 Panicum virgatum Pavir.J02718 I
Pavir.J25000 Panicum virgatum Pavir.J25000 I
Pavir.J37434 Panicum virgatum Pavir.J37434 I
POPTR_0005s12050 Populus trichocarpa POPTR_0005s12050 I
POPTR_0015s08880 Populus trichocarpa POPTR_0015s08880 I
Pm024743 Prunus mume Pm024743 I
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I
29917.m001977 Ricinus communis 29917.m001977 I
30147.m013937 Ricinus communis 30147.m013937 I
SapurV1A.0396s0170 Salix purpurea SapurV1A.0396s0170 I
SapurV1A.2163s0040 Salix purpurea SapurV1A.2163s0040 I
Si039046m.g Setaria italica Si039046m.g I
Solyc03g112890.1 Solanum lycopersicum Solyc03g112890.1 I
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I
PGSC0003DMG400018092 Solanum tuberosum PGSC0003DMG400018092 I
PGSC0003DMG400036895 Solanum tuberosum PGSC0003DMG400036895 I
Sb01g005100 Sorghum bicolor Sb01g005100 I
TCM_012087 Theobroma cacao TCM_012087 I
Traes_1BL_4D9406708 Triticum aestivum Traes_1BL_4D9406708 I
Traes_1DL_918A8F357 Triticum aestivum Traes_1DL_918A8F357 I
Traes_7AS_A337F362A Triticum aestivum Traes_7AS_A337F362A I
Traes_7BS_D28CCE3B8 Triticum aestivum Traes_7BS_D28CCE3B8 I
Traes_7DS_E27ECBC6E Triticum aestivum Traes_7DS_E27ECBC6E I
TRIUR3_12421 Triticum urartu TRIUR3_12421 I
MYB98 Vitis vinifera VIT_17s0000g08550 I
GRMZM2G302549 Zea mays GRMZM2G302549 I
GRMZM5G870592 Zea mays GRMZM5G870592 I