Ocbimv22007989m.g (Octopus bimaculoides)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ocbimv22007989m.g T140687_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22007989m.p C2H2 ZF 48 70
Ocbimv22007989m.p C2H2 ZF 76 98
Ocbimv22007989m.p C2H2 ZF 104 126
Ocbimv22007989m.p C2H2 ZF 132 154
Ocbimv22007989m.p C2H2 ZF 160 182
Ocbimv22007989m.p C2H2 ZF 188 210
Ocbimv22007989m.p C2H2 ZF 216 238
Ocbimv22007990m.p C2H2 ZF 48 70
Ocbimv22007990m.p C2H2 ZF 76 98
Ocbimv22007990m.p C2H2 ZF 104 126
Ocbimv22007990m.p C2H2 ZF 132 154
Ocbimv22007990m.p C2H2 ZF 160 182
Ocbimv22007990m.p C2H2 ZF 188 210
Ocbimv22007990m.p C2H2 ZF 216 238

Links

Other C2H2 ZF family TFs
Other Octopus bimaculoides TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00060p00124510 Amborella trichopoda AMTR_s00060p00124510 N
ATNFXL1 Arabidopsis lyrata fgenesh2_kg.1__1086__AT1G10170.1 N
ATNFXL1 Arabidopsis thaliana AT1G10170 N
Bostr.15697s0430 Boechera stricta Bostr.15697s0430 N
Bo5g010600 Brassica oleracea Bo5g010600 N
Bo8g059130 Brassica oleracea Bo8g059130 N
Bra018458 Brassica rapa Bra018458 N
Bra019958 Brassica rapa Bra019958 N
Cagra.4395s0205 Capsella grandiflora Cagra.4395s0205 N
Thhalv10006708m.g Eutrema salsugineum Thhalv10006708m.g N
chr2.LjT01H08.70.nc Lotus japonicus chr2.LjT01H08.70.nc N
MDP0000280911 Malus domestica MDP0000280911 N
MTR_4g027040 Medicago truncatula MTR_4g027040 N
POPTR_0015s05030 Populus trichocarpa POPTR_0015s05030 N
Pm025049 Prunus mume Pm025049 N
PRUPE_ppa000543mg Prunus persica PRUPE_ppa000543mg N
27791.m000083 Ricinus communis 27791.m000083 N
SapurV1A.0082s0290 Salix purpurea SapurV1A.0082s0290 N
Solyc03g118420.2 Solanum lycopersicum Solyc03g118420.2 N
PGSC0003DMG400014182 Solanum tuberosum PGSC0003DMG400014182 N
VIT_17s0000g01920 Vitis vinifera VIT_17s0000g01920 N
GRMZM2G409627 Zea mays GRMZM2G409627 N
GRMZM2G307823 Zea mays GRMZM2G307823 N