CGI_10018383 (Crassostrea gigas)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 CGI_10018383 T166001_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.832 0.832
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.832 0.832
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.832 0.832
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.832 0.832
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.832 0.832
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.832 0.832
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.832 0.832
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.832 0.832
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.832 0.832
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.832 0.832
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.832 0.832
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.832 0.832
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.832 0.832
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.802 0.802
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC28192 CSL 211 341

Links

Other CSL family TFs
Other Crassostrea gigas TFs

145 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI001225 Acyrthosiphon pisum ACYPI001225 I 0.718
AAEL006419 Aedes aegypti AAEL006419 I 0.748
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I 0.832
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I 0.832
ENSAPLG00000007512 Anas platyrhynchos ENSAPLG00000007512 I 0.840
RBPJ Anolis carolinensis ENSACAG00000014578 I 0.832
AALB007981 Anopheles albimanus AALB007981 I 0.740
AATE009298 Anopheles atroparvus AATE009298 I 0.733
ACOM040639 Anopheles coluzzii ACOM040639 I 0.740
ACUA014515 Anopheles culicifacies ACUA014515 I 0.740
ADIR011431 Anopheles dirus ADIR011431 I 0.740
AFAF012186 Anopheles farauti AFAF012186 I 0.740
AFUN007280 Anopheles funestus AFUN007280 I 0.740
AGAP008935 Anopheles gambiae AGAP008935 I 0.740
AMEM004324 Anopheles merus AMEM004324 I 0.740
AMIN005880 Anopheles minimus AMIN005880 I 0.740
AQUA011533 Anopheles quadriannulatus AQUA011533 I 0.734
ASTEI01929 Anopheles stephensi ASTEI01929 I 0.733
GB45655 Apis mellifera GB45655 I 0.771
Afo_R009248 Aptenodytes forsteri Afo_R009248 I 0.840
ENSAMXG00000010835 Astyanax mexicanus ENSAMXG00000010835 I 0.794
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I 0.771
ACEP17167 Atta cephalotes ACEP17167 I 0.771
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.786
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I 0.832
RBPJ Bos taurus ENSBTAG00000003602 I 0.832
fgenesh2_pg.scaffold_60000013 Branchiostoma floridae fgenesh2_pg.scaffold_60000013 I 0.809
fgenesh2_pg.scaffold_82000019 Branchiostoma floridae fgenesh2_pg.scaffold_82000019 I 0.817
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.714
Brh_R001357 Buceros rhinoceros Brh_R001357 I 0.840
RBPJ Callithrix jacchus ENSCJAG00000021033 I 0.832
Aan_R011115 Calypte anna Aan_R011115 I 0.840
Cflo_01916--XP_397309.1_APIME Camponotus floridanus Cflo_01916--XP_397309.1_APIME I 0.771
RBPJ Canis familiaris ENSCAFG00000016387 I 0.832
CapteG179039 Capitella teleta CapteG179039 I 0.840
RBPJ Cavia porcellus ENSCPOG00000007041 I 0.786
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I 0.832
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I 0.832
CLEC005205 Cimex lectularius CLEC005205 I 0.756
su(h) Ciona intestinalis ENSCING00000000838 I 0.710
ENSCSAVG00000010744 Ciona savignyi ENSCSAVG00000010744 I 0.718
CpipJ_CPIJ004183 Culex pipiens CpipJ_CPIJ004183 I 0.710
CPIJ004183 Culex quinquefasciatus CPIJ004183 I 0.710
KGM_08407 Danaus plexippus KGM_08407 I 0.794
rbpja Danio rerio ENSDARG00000003398 I 0.786
rbpjb Danio rerio ENSDARG00000052091 I 0.809
DAPPUDRAFT_98470 Daphnia pulex DAPPUDRAFT_98470 I 0.771
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I 0.832
YQE_03219 Dendroctonus ponderosae YQE_03219 I 0.771
DILT_0001372901 Diphyllobothrium latum DILT_0001372901 I 0.740
Rbpj Dipodomys ordii ENSDORG00000006352 I 0.832
GF14905 Drosophila ananassae FBgn0091930 I 0.802
GG25142 Drosophila erecta FBgn0117267 I 0.802
GH10915 Drosophila grimshawi FBgn0118396 I 0.802
Su(H) Drosophila melanogaster FBgn0004837 D 0.802
GI13259 Drosophila mojavensis FBgn0136016 I 0.794
GL26026 Drosophila persimilis FBgn0163608 I 0.802
GA25242 Drosophila pseudoobscura FBgn0246623 I 0.802
GA25243 Drosophila pseudoobscura FBgn0246624 I 0.802
GM15894 Drosophila sechellia FBgn0170810 I 0.802
Su(H) Drosophila simulans FBgn0027417 I 0.802
GJ11880 Drosophila virilis FBgn0199134 I 0.802
GE20814 Drosophila yakuba FBgn0238107 I 0.802
RBPJ Equus caballus ENSECAG00000019257 I 0.832
RBPJ Erinaceus europaeus ENSEEUG00000009686 I 0.832
D915_08968 Fasciola hepatica D915_08968 I 0.727
RBPJ Felis catus ENSFCAG00000030363 I 0.808
ENSFALG00000009154 Ficedula albicollis ENSFALG00000009154 I 0.840
ENSGMOG00000004951 Gadus morhua ENSGMOG00000004951 I 0.771
ENSGMOG00000006156 Gadus morhua ENSGMOG00000006156 I 0.787
RBPJ Gallus gallus ENSGALG00000014365 I 0.840
rbpja Gasterosteus aculeatus ENSGACG00000015888 I 0.748
Gfo_R010339 Geospiza fortis Gfo_R010339 I 0.840
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.824
RBPJ Gorilla gorilla ENSGGOG00000004582 I 0.832
HHAL001644-PA Halyomorpha halys HHAL001644-PA I 0.756
Hsal_09918--XP_397309.1_APIME Harpegnathos saltator Hsal_09918--XP_397309.1_APIME I 0.779
HMEL017244 Heliconius melpomene HMEL017244 I 0.794
HelroG186992 Helobdella robusta HelroG186992 I 0.733
RBPJ Homo sapiens ENSG00000168214 D 0.875
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I 0.832
ISCW010197 Ixodes scapularis ISCW010197 I 0.756
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I 0.832
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I 0.832
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.779
LotgiG159505 Lottia gigantea LotgiG159505 I 0.832
RBPJ Loxodonta africana ENSLAFG00000000410 I 0.832
LCUP003485 Lucilia cuprina LCUP003485 I 0.794
LLOJ000759 Lutzomyia longipalpis LLOJ000759 I 0.725
ENSP00000354528 Macaca fascicularis ENSP00000354528 I 0.832
RBPJ Macaca mulatta ENSMMUG00000015828 I 0.832
MESCA005881 Megaselia scalaris MESCA005881 I 0.758
RBPJ Meleagris gallopavo ENSMGAG00000012418 I 0.832
RBPJ Monodelphis domestica ENSMODG00000000129 I 0.832
MDOA002342 Musca domestica MDOA002342 I 0.794
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I 0.832
Rbpj Mus musculus ENSMUSG00000039191 D 0.832
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I 0.832
RBPJ Myotis lucifugus ENSMLUG00000017187 I 0.832
NV17858 Nasonia vitripennis NV17858 I 0.756
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I 0.832
Ocbimv22031643m.g Octopus bimaculoides Ocbimv22031643m.g I 0.885
Ogr02745 Ophisaurus gracilis Ogr02745 I 0.822
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I 0.756
ENSONIG00000009281 Oreochromis niloticus ENSONIG00000009281 I 0.817
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I 0.832
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I 0.832
rbpja Oryzias latipes ENSORLG00000004882 I 0.713
RBPJ Otolemur garnettii ENSOGAG00000007913 I 0.832
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I 0.832
RBPJ Pan troglodytes ENSPTRG00000015968 I 0.832
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I 0.832
PHUM462870 Pediculus humanus PHUM462870 I 0.756
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I 0.832
ENSPFOG00000012004 Poecilia formosa ENSPFOG00000012004 I 0.824
Pvit_10584 Pogona vitticeps Pvit_10584 I 0.832
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I 0.832
ENSPPYG00000019874 Pongo abelii ENSPPYG00000019874 I 0.718
RBPJ Pteropus vampyrus ENSPVAG00000014199 I 0.832
Rbpj Rattus norvegicus ENSRNOG00000007797 I 0.779
Rbpj Rattus norvegicus ENSRNOG00000046327 I 0.832
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I 0.847
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I 0.832
SINV15808 Solenopsis invicta SINV15808 I 0.771
RBPJ Sorex araneus ENSSARG00000001169 I 0.832
SPER_0003199901 Spirometra erinaceieuropaei SPER_0003199901 I 0.740
SMAR001432 Strigamia maritima SMAR001432 I 0.847
RBPJ Sus scrofa ENSSSCG00000022155 I 0.832
RBPJ Taeniopygia guttata ENSTGUG00000009245 I 0.840
RBPJ Takifugu rubripes ENSTRUG00000014798 I 0.832
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I 0.832
tetur04g02700 Tetranychus urticae tetur04g02700 I 0.736
tetur04g02730 Tetranychus urticae tetur04g02730 I 0.736
tetur11g00180 Tetranychus urticae tetur11g00180 I 0.702
RBPJ Tetraodon nigroviridis ENSTNIG00000012994 I 0.824
TC014468 Tribolium castaneum TC014468 I 0.779
RBPJ Tupaia belangeri ENSTBEG00000002676 I 0.832
RBPJ Tursiops truncatus ENSTTRG00000009022 I 0.832
Tal_R001466 Tyto alba Tal_R001466 I 0.840
AAB05479 Xenopus laevis AAB05479 I 0.824
rbpj.S Xenopus laevis XB-GENE-865998 I 0.824
rbpj Xenopus tropicalis XB-GENE-490756 I 0.832
ENSXMAG00000009877 Xiphophorus maculatus ENSXMAG00000009877 I 0.824
ENSXMAG00000012207 Xiphophorus maculatus ENSXMAG00000012207 I 0.702
L798_15068 Zootermopsis nevadensis L798_15068 I 0.786