rbpja (Danio rerio)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 ENSDARG00000003398 T166043_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.946 0.946
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.946 0.946
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.946 0.946
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.946 0.946
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.946 0.946
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.946 0.946
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.946 0.946
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.946 0.946
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.946 0.946
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.946 0.946
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.946 0.946
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.946 0.946
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.946 0.946
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.767 0.767
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.767 0.767
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000026585 CSL 35 165

Links

Other CSL family TFs
Other Danio rerio TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI001225 Acyrthosiphon pisum ACYPI001225 I 0.738
ACYPI009607 Acyrthosiphon pisum ACYPI009607 I 0.710
AAEL006419 Aedes aegypti AAEL006419 I 0.771
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I 0.931
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I 0.931
ENSAPLG00000007512 Anas platyrhynchos ENSAPLG00000007512 I 0.924
RBPJ Anolis carolinensis ENSACAG00000014578 I 0.931
AALB007981 Anopheles albimanus AALB007981 I 0.779
AARA009493 Anopheles arabiensis AARA009493 I 0.740
AATE009298 Anopheles atroparvus AATE009298 I 0.771
ACOM040639 Anopheles coluzzii ACOM040639 I 0.779
ACUA014515 Anopheles culicifacies ACUA014515 I 0.779
ADAC001896 Anopheles darlingi ADAC001896 I 0.729
ADIR011431 Anopheles dirus ADIR011431 I 0.779
AEPI005106 Anopheles epiroticus AEPI005106 I 0.744
AFAF012186 Anopheles farauti AFAF012186 I 0.779
AFUN007280 Anopheles funestus AFUN007280 I 0.779
AGAP008935 Anopheles gambiae AGAP008935 I 0.779
AMAM009373 Anopheles maculatus AMAM009373 I 0.733
AMEC017285 Anopheles melas AMEC017285 I 0.740
AMEM004324 Anopheles merus AMEM004324 I 0.779
AMIN005880 Anopheles minimus AMIN005880 I 0.779
AQUA011533 Anopheles quadriannulatus AQUA011533 I 0.782
ASIS021327 Anopheles sinensis ASIS021327 I 0.768
ASTEI01929 Anopheles stephensi ASTEI01929 I 0.771
GB45655 Apis mellifera GB45655 I 0.815
Afo_R009248 Aptenodytes forsteri Afo_R009248 I 0.924
ENSAMXG00000010835 Astyanax mexicanus ENSAMXG00000010835 I 0.916
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I 0.985
ACEP17167 Atta cephalotes ACEP17167 I 0.815
BGLB010819 Biomphalaria glabrata BGLB010819 I 0.912
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.814
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I 0.931
RBPJ Bos taurus ENSBTAG00000003602 I 0.931
fgenesh2_pg.scaffold_60000013 Branchiostoma floridae fgenesh2_pg.scaffold_60000013 I 0.794
fgenesh2_pg.scaffold_82000019 Branchiostoma floridae fgenesh2_pg.scaffold_82000019 I 0.786
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.762
Brh_R001357 Buceros rhinoceros Brh_R001357 I 0.924
RBPJ Callithrix jacchus ENSCJAG00000021033 I 0.931
Aan_R011115 Calypte anna Aan_R011115 I 0.924
Cflo_01916--XP_397309.1_APIME Camponotus floridanus Cflo_01916--XP_397309.1_APIME I 0.815
RBPJ Canis familiaris ENSCAFG00000016387 I 0.931
CapteG179039 Capitella teleta CapteG179039 I 0.779
RBPJ Cavia porcellus ENSCPOG00000007041 I 0.874
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I 0.931
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I 0.931
CLEC005205 Cimex lectularius CLEC005205 I 0.800
su(h) Ciona intestinalis ENSCING00000000838 I 0.738
ENSCSAVG00000010744 Ciona savignyi ENSCSAVG00000010744 I 0.760
CGI_10018383 Crassostrea gigas CGI_10018383 I 0.786
CpipJ_CPIJ004183 Culex pipiens CpipJ_CPIJ004183 I 0.758
CPIJ004183 Culex quinquefasciatus CPIJ004183 I 0.758
KGM_08407 Danaus plexippus KGM_08407 I 0.815
rbpjb Danio rerio ENSDARG00000052091 I 0.947
DAPPUDRAFT_98470 Daphnia pulex DAPPUDRAFT_98470 I 0.705
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I 0.931
YQE_03219 Dendroctonus ponderosae YQE_03219 I 0.815
Rbpj Dipodomys ordii ENSDORG00000006352 I 0.931
GF14905 Drosophila ananassae FBgn0091930 I 0.756
GG25142 Drosophila erecta FBgn0117267 I 0.756
GH10915 Drosophila grimshawi FBgn0118396 I 0.756
Su(H) Drosophila melanogaster FBgn0004837 D 0.756
GI13259 Drosophila mojavensis FBgn0136016 I 0.748
GL26026 Drosophila persimilis FBgn0163608 I 0.756
GA25242 Drosophila pseudoobscura FBgn0246623 I 0.756
GA25243 Drosophila pseudoobscura FBgn0246624 I 0.756
GM15894 Drosophila sechellia FBgn0170810 I 0.756
Su(H) Drosophila simulans FBgn0027417 I 0.756
GJ11880 Drosophila virilis FBgn0199134 I 0.756
GE20814 Drosophila yakuba FBgn0238107 I 0.756
ECPE_0001338601 Echinostoma caproni ECPE_0001338601 I 0.714
RBPJ Equus caballus ENSECAG00000019257 I 0.931
RBPJ Erinaceus europaeus ENSEEUG00000009686 I 0.931
D915_08967 Fasciola hepatica D915_08967 I 0.833
D915_08968 Fasciola hepatica D915_08968 I 0.727
RBPJ Felis catus ENSFCAG00000030363 I 0.885
ENSFALG00000009154 Ficedula albicollis ENSFALG00000009154 I 0.924
ENSGMOG00000004951 Gadus morhua ENSGMOG00000004951 I 0.946
ENSGMOG00000006156 Gadus morhua ENSGMOG00000006156 I 0.963
RBPJ Gallus gallus ENSGALG00000014365 I 0.924
rbpja Gasterosteus aculeatus ENSGACG00000015888 I 0.915
Gfo_R010339 Geospiza fortis Gfo_R010339 I 0.924
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.765
RBPJ Gorilla gorilla ENSGGOG00000004582 I 0.931
HHAL001644-PA Halyomorpha halys HHAL001644-PA I 0.800
Hsal_09918--XP_397309.1_APIME Harpegnathos saltator Hsal_09918--XP_397309.1_APIME I 0.808
HMEL017244 Heliconius melpomene HMEL017244 I 0.815
RBPJ Homo sapiens ENSG00000168214 D 1.000
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I 0.931
ISCW010197 Ixodes scapularis ISCW010197 I 0.748
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I 0.931
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I 0.931
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.829
LotgiG159505 Lottia gigantea LotgiG159505 I 0.771
RBPJ Loxodonta africana ENSLAFG00000000410 I 0.931
LCUP003485 Lucilia cuprina LCUP003485 I 0.748
LLOJ000758 Lutzomyia longipalpis LLOJ000758 I 0.722
LLOJ000759 Lutzomyia longipalpis LLOJ000759 I 0.725
ENSP00000354528 Macaca fascicularis ENSP00000354528 I 0.931
RBPJ Macaca mulatta ENSMMUG00000015828 I 0.931
MESCA005881 Megaselia scalaris MESCA005881 I 0.735
RBPJ Meleagris gallopavo ENSMGAG00000012418 I 0.881
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I 0.824
RBPJ Monodelphis domestica ENSMODG00000000129 I 0.924
MDOA002342 Musca domestica MDOA002342 I 0.748
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I 0.931
Rbpj Mus musculus ENSMUSG00000039191 D 0.931
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I 0.931
RBPJ Myotis lucifugus ENSMLUG00000017187 I 0.931
NV17858 Nasonia vitripennis NV17858 I 0.815
NV17967 Nasonia vitripennis NV17967 I 0.742
NECAME_17145 Necator americanus NECAME_17145 I 0.714
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I 0.931
Ocbimv22031643m.g Octopus bimaculoides Ocbimv22031643m.g I 0.802
Ogr02745 Ophisaurus gracilis Ogr02745 I 0.924
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I 0.930
ENSONIG00000009281 Oreochromis niloticus ENSONIG00000009281 I 0.916
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I 0.931
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I 0.931
rbpja Oryzias latipes ENSORLG00000004882 I 0.853
ENSORLG00000006995 Oryzias latipes ENSORLG00000006995 I 0.909
RBPJ Otolemur garnettii ENSOGAG00000007913 I 0.931
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I 0.931
RBPJ Pan troglodytes ENSPTRG00000015968 I 0.931
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I 0.931
PHUM462870 Pediculus humanus PHUM462870 I 0.800
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I 0.931
PPAI000792 Phlebotomus papatasi PPAI000792 I 0.726
ENSPFOG00000012004 Poecilia formosa ENSPFOG00000012004 I 0.916
ENSPFOG00000016494 Poecilia formosa ENSPFOG00000016494 I 0.845
Pvit_10584 Pogona vitticeps Pvit_10584 I 0.931
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I 0.931
ENSPPYG00000019874 Pongo abelii ENSPPYG00000019874 I 0.792
scaffold595-EXSNAP2012.9 Pristionchus exspectatus scaffold595-EXSNAP2012.9 I 0.714
RBPJ Pteropus vampyrus ENSPVAG00000014199 I 0.931
Rbpj Rattus norvegicus ENSRNOG00000007797 I 0.862
Rbpj Rattus norvegicus ENSRNOG00000046327 I 0.931
RPRC014254 Rhodnius prolixus RPRC014254 I 0.727
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I 0.794
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I 0.924
SCUD_0000326701 Schistosoma curassoni SCUD_0000326701 I 0.833
Sjc_0108400 Schistosoma japonicum Sjc_0108400 I 0.833
SMRZ_0000802101 Schistosoma margrebowiei SMRZ_0000802101 I 0.833
SMTD_0001089601 Schistosoma mattheei SMTD_0001089601 I 0.833
SINV15808 Solenopsis invicta SINV15808 I 0.815
RBPJ Sorex araneus ENSSARG00000001169 I 0.931
SMAR001432 Strigamia maritima SMAR001432 I 0.798
SSTP_0000504800 Strongyloides stercoralis SSTP_0000504800 N 0.705
RBPJ Sus scrofa ENSSSCG00000022155 I 0.931
SMUV_0001013801 Syphacia muris SMUV_0001013801 I 0.727
RBPJ Taeniopygia guttata ENSTGUG00000009245 I 0.924
RBPJ Takifugu rubripes ENSTRUG00000014798 I 0.931
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I 0.931
tetur04g02700 Tetranychus urticae tetur04g02700 I 0.798
tetur04g02730 Tetranychus urticae tetur04g02730 I 0.798
tetur11g00180 Tetranychus urticae tetur11g00180 I 0.771
tetur11g06371 Tetranychus urticae tetur11g06371 I 0.725
RBPJ Tetraodon nigroviridis ENSTNIG00000012994 I 0.924
TC014468 Tribolium castaneum TC014468 I 0.829
TRE_0000568701 Trichobilharzia regenti TRE_0000568701 I 0.833
RBPJ Tupaia belangeri ENSTBEG00000002676 I 0.931
RBPJ Tursiops truncatus ENSTTRG00000009022 I 0.931
Tal_R001466 Tyto alba Tal_R001466 I 0.924
RBPJ Vicugna pacos ENSVPAG00000003620 I 0.959
ENSVPAG00000005031 Vicugna pacos ENSVPAG00000005031 I 0.944
AAB05479 Xenopus laevis AAB05479 I 0.939
rbpj.S Xenopus laevis XB-GENE-865998 I 0.939
rbpj Xenopus tropicalis XB-GENE-490756 I 0.931
ENSXMAG00000009877 Xiphophorus maculatus ENSXMAG00000009877 I 0.916
ENSXMAG00000012207 Xiphophorus maculatus ENSXMAG00000012207 I 0.860
L798_15068 Zootermopsis nevadensis L798_15068 I 0.815