CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FBXL19
(
Gorilla gorilla
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSGGOG00000003625
T168012_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.872
0.872
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.830
0.830
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.830
0.830
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.809
0.809
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.766
0.766
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.745
0.745
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000003563
CxxC
13
59
GRKRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC
Links
Other
CxxC
family TFs
Other
Gorilla gorilla
TFs
204 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FHY3
Arabidopsis thaliana
AT3G22170
D
Bostr.19424s0443
Boechera stricta
Bostr.19424s0443
I
Bo5g098280
Brassica oleracea
Bo5g098280
I
Bra031330
Brassica rapa
Bra031330
I
PK08903.1
Cannabis sativa
PK08903.1
I
Cagra.2420s0008
Capsella grandiflora
Cagra.2420s0008
I
Carubv10013009m.g
Capsella rubella
Carubv10013009m.g
I
evm.TU.supercontig_8.288
Carica papaya
evm.TU.supercontig_8.288
I
Cucsa.180080
Cucumis sativus
Cucsa.180080
I
Eucgr.A00908
Eucalyptus grandis
Eucgr.A00908
I
Thhalv10020053m.g
Eutrema salsugineum
Thhalv10020053m.g
I
gene24214-v1.0-hybrid
Fragaria vesca
gene24214-v1.0-hybrid
I
GLYMA04G14850
Glycine max
GLYMA04G14850
I
GLYMA06G47210
Glycine max
GLYMA06G47210
I
Gorai.005G134200
Gossypium raimondii
Gorai.005G134200
I
MDP0000286803
Malus domestica
MDP0000286803
I
cassava31125.valid.m1
Manihot esculenta
cassava31125.valid.m1
I
cassava31126.valid.m1
Manihot esculenta
cassava31126.valid.m1
I
cassava31127.valid.m1
Manihot esculenta
cassava31127.valid.m1
I
cassava31128.valid.m1
Manihot esculenta
cassava31128.valid.m1
I
mgf014333m
Mimulus guttatus
mgf014333m
I
mgf009829m
Mimulus guttatus
mgf009829m
I
POPTR_0006s02150
Populus trichocarpa
POPTR_0006s02150
I
POPTR_0016s01980
Populus trichocarpa
POPTR_0016s01980
I
Pm014859
Prunus mume
Pm014859
I
PRUPE_ppa001344mg
Prunus persica
PRUPE_ppa001344mg
I
SapurV1A.0154s0240
Salix purpurea
SapurV1A.0154s0240
I
SapurV1A.0767s0100
Salix purpurea
SapurV1A.0767s0100
I
Solyc07g043270.2
Solanum lycopersicum
Solyc07g043270.2
I
TCM_013043
Theobroma cacao
TCM_013043
I
FHY3
Vitis vinifera
VIT_03s0017g01780
I