Pvit_05476 (Pogona vitticeps)
CxxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02008 (zf-CXXC) IPR002857 Pvit_05476 T168644_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KDM2B
M01911_2.00 		Homo sapiens
NNNNNNCGN
NCGNNNNNN		 PBM
Weirauch et al.(2014)
pTH9191 		0.915 0.915
kdm2ba
M01909_2.00 		Danio rerio
NNNNCGN
NCGNNNN		 PBM
Weirauch et al.(2014)
pTH8577 		0.894 0.894
FBXL19
M01916_2.00 		Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN		 PBM
Weirauch et al.(2014)
pTH8570 		0.894 0.894
A6H8I1_DANRE
M01906_2.00 		Danio rerio
CGTACGYA
TRCGTACG		 PBM
Weirauch et al.(2014)
pTH9257 		0.851 0.851
KDM2A
M01915_2.00 		Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH9212 		0.809 0.809
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_05476 CxxC 10 56

Links

Other CxxC family TFs
Other Pogona vitticeps TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FHY3 Arabidopsis thaliana AT3G22170 D
Bostr.19424s0443 Boechera stricta Bostr.19424s0443 I
Bo1g105420 Brassica oleracea Bo1g105420 I
Bo5g098280 Brassica oleracea Bo5g098280 I
Bra031330 Brassica rapa Bra031330 I
PK08903.1 Cannabis sativa PK08903.1 I
Cagra.2420s0008 Capsella grandiflora Cagra.2420s0008 I
Carubv10013009m.g Capsella rubella Carubv10013009m.g I
evm.TU.supercontig_8.288 Carica papaya evm.TU.supercontig_8.288 I
Cucsa.180080 Cucumis sativus Cucsa.180080 I
Eucgr.A00908 Eucalyptus grandis Eucgr.A00908 I
Thhalv10020053m.g Eutrema salsugineum Thhalv10020053m.g I
gene24214-v1.0-hybrid Fragaria vesca gene24214-v1.0-hybrid I
GLYMA04G14850 Glycine max GLYMA04G14850 I
GLYMA06G47210 Glycine max GLYMA06G47210 I
Gorai.005G134200 Gossypium raimondii Gorai.005G134200 I
MDP0000286803 Malus domestica MDP0000286803 I
cassava31125.valid.m1 Manihot esculenta cassava31125.valid.m1 I
cassava31126.valid.m1 Manihot esculenta cassava31126.valid.m1 I
cassava31127.valid.m1 Manihot esculenta cassava31127.valid.m1 I
cassava31128.valid.m1 Manihot esculenta cassava31128.valid.m1 I
mgf014333m Mimulus guttatus mgf014333m I
mgf009829m Mimulus guttatus mgf009829m I
POPTR_0006s02150 Populus trichocarpa POPTR_0006s02150 I
POPTR_0016s01980 Populus trichocarpa POPTR_0016s01980 I
Pm014859 Prunus mume Pm014859 I
PRUPE_ppa001344mg Prunus persica PRUPE_ppa001344mg I
30106.m000672 Ricinus communis 30106.m000672 I
SapurV1A.0154s0240 Salix purpurea SapurV1A.0154s0240 I
SapurV1A.0767s0090 Salix purpurea SapurV1A.0767s0090 I
SapurV1A.0767s0100 Salix purpurea SapurV1A.0767s0100 I
Solyc07g043270.2 Solanum lycopersicum Solyc07g043270.2 I
TCM_013043 Theobroma cacao TCM_013043 I
FHY3 Vitis vinifera VIT_03s0017g01780 I