CpipJ_CPIJ004057 (Culex pipiens)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00751 (DM) IPR001275 CpipJ_CPIJ004057 T168853_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
dsx
M06183_2.00 		Drosophila melanogaster
TDRYVACWTWGYAG
CTRCWAWGTBRYHA		 B1H
Zhu et al.(2011)
dsx-F_FlyReg_FBgn0000504 		0.948 0.872
dsx
M06184_2.00 		Drosophila melanogaster
TDRYVACWTWGYAG
CTRCWAWGTBRYHA		 B1H
Zhu et al.(2011)
dsx-M_FlyReg_FBgn0000504 		0.948 0.872
dmrt99B
M01935_2.00 		Drosophila melanogaster
WRTWDCNDNN
NNHNGHWAYW		 PBM
Weirauch et al.(2014)
pTH9261 		0.867 0.681
dmrt99B
M01211_2.00 		Drosophila melanogaster
NNHDTDDNNN
NNNHHAHDNN		 PBM
Lambert et al.(2019)
pTH9799 		0.867 0.681
dmrt99B
M03720_2.00 		Drosophila melanogaster
HNGHWACAATGTWDCND
HNGHWACATTGTWDCND		 SELEX
Nitta et al.(2015)
dmrt99B_1 		0.867 0.681
DMRTA2
M01930_2.00 		Homo sapiens
NNHDTDDNNN
NNNHHAHDNN		 PBM
Weirauch et al.(2014)
pTH9198 		0.867 0.660
dmrta2
M01937_2.00 		Xenopus tropicalis
NNWDWDDN
NHHWHWNN		 PBM
Weirauch et al.(2014)
pTH9300 		0.867 0.660
DMRTA2
M04692_2.00 		Homo sapiens
VHTGTWDCVDHN
NDHBGHWACADB		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_HT-SELEX 		0.867 0.660
DMRTA2
M10433_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT5_01 		0.867 0.660
DMRTA2
M04693_2.00 		Homo sapiens
HHTGTWDCVNHN
NDNBGHWACADD		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_Methyl-HT-SELEX 		0.867 0.660
dmd-5
M00659_2.00 		Caenorhabditis elegans
WNWRTWDHNN
NNDHWAYWNW		 PBM
Narasimhan et al.(2015)
pTH10777 		0.864 0.660
dmd-4
M00656_2.00 		Caenorhabditis elegans
NWGTAWCNNN
NNNGWTACWN		 PBM
Narasimhan et al.(2015)
pTH10640 		0.858 0.723
DMRT3
M01927_2.00 		Homo sapiens
NWTGTAWCMNN
NNKGWTACAWN		 PBM
Weirauch et al.(2014)
pTH9188 		0.846 0.660
DMRT3
M04681_2.00 		Homo sapiens
AWTGTAWCAAWWH
DWWTTGWTACAWT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_HT-SELEX 		0.846 0.660
DMRT3
M10430_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT3_01 		0.846 0.660
DMRT3
M04682_2.00 		Homo sapiens
AATGTAWCRAWWY
RWWTYGWTACATT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_Methyl-HT-SELEX 		0.846 0.660
For this family, TFs with SR scores > 0.845 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ004057-RA DM 36 82

Links

Other DM family TFs
Other Culex pipiens TFs

286 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00021p00221770 Amborella trichopoda AMTR_s00021p00221770 N
Aquca_100_00036 Aquilegia coerulea Aquca_100_00036 N
ARF1 Arabidopsis lyrata fgenesh2_kg.2__468__AT1G59750.1 N
ARF1 Arabidopsis thaliana AT1G59750 N
Bostr.10040s0256 Boechera stricta Bostr.10040s0256 N
Bo1g090350 Brassica oleracea Bo1g090350 N
Bo4g083590 Brassica oleracea Bo4g083590 N
Bra035427 Brassica rapa Bra035427 N
Cagra.0996s0001 Capsella grandiflora Cagra.0996s0001 N
Carubv10022415m.g Capsella rubella Carubv10022415m.g N
Carubv10006513m.g Capsella rubella Carubv10006513m.g N
Cla001927 Citrullus lanatus Cla001927 N
Cla015243 Citrullus lanatus Cla015243 N
Ciclev10000491m.g Citrus clementina Ciclev10000491m.g N
Cucsa.183410 Cucumis sativus Cucsa.183410 N
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I
Thhalv10023326m.g Eutrema salsugineum Thhalv10023326m.g N
GLYMA07G40270 Glycine max GLYMA07G40270 N
GLYMA12G28550 Glycine max GLYMA12G28550 N
Gorai.011G091100 Gossypium raimondii Gorai.011G091100 N
MLOC_64596 Hordeum vulgare MLOC_64596 I
LPERR02G16580 Leersia perrieri LPERR02G16580 N
Lus10024455.g Linum usitatissimum Lus10024455.g N
Lus10007440.g Linum usitatissimum Lus10007440.g N
cassava7099.valid.m1 Manihot esculenta cassava7099.valid.m1 N
cassava7098.valid.m1 Manihot esculenta cassava7098.valid.m1 N
cassava11456.m1 Manihot esculenta cassava11456.m1 N
cassava11455.m1 Manihot esculenta cassava11455.m1 N
cassava11454.m1 Manihot esculenta cassava11454.m1 N
cassava11453.m1 Manihot esculenta cassava11453.m1 N
MTR_8g027440 Medicago truncatula MTR_8g027440 N
mgf006427m Mimulus guttatus mgf006427m N
GSMUA_Achr2G19760_001 Musa acuminata GSMUA_Achr2G19760_001 N
ORGLA02G0176700 Oryza glaberrima ORGLA02G0176700 N
OGLUM02G20880 Oryza glumaepatula OGLUM02G20880 N
BGIOSGA008429 Oryza indica BGIOSGA008429 N
OLONG_012362 Oryza longistaminata OLONG_012362 N
OMERI02G20310 Oryza meridionalis OMERI02G20310 N
ONIVA02G22590 Oryza nivara ONIVA02G22590 N
OPUNC02G18520 Oryza punctata OPUNC02G18520 N
ORUFI02G21640 Oryza rufipogon ORUFI02G21640 N
ARF7 Oryza sativa OS02G0557200 N
POPTR_0003s00890 Populus trichocarpa POPTR_0003s00890 N
PRUPE_ppa002394mg Prunus persica PRUPE_ppa002394mg N
29609.m000587 Ricinus communis 29609.m000587 N
29742.m001397 Ricinus communis 29742.m001397 N
SapurV1A.0225s0120 Salix purpurea SapurV1A.0225s0120 N
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I
Solyc01g103050.2 Solanum lycopersicum Solyc01g103050.2 N
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I
Sb04g022830 Sorghum bicolor Sb04g022830 N
TCM_027113 Theobroma cacao TCM_027113 I
Traes_2AL_89543BA1A Triticum aestivum Traes_2AL_89543BA1A N
Traes_2DL_A86E54838 Triticum aestivum Traes_2DL_A86E54838 N
TRIUR3_33501 Triticum urartu TRIUR3_33501 N
VIT_18s0089g00910 Vitis vinifera VIT_18s0089g00910 N