Bo3g019610 (Brassica oleracea)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bo3g019610 T191881_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.811 0.722
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.811 0.722
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g019610.1 GATA 225 260

Links

Other GATA family TFs
Other Brassica oleracea TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_00859 Aegilops tauschii F775_00859 I 0.811
F775_42893 Aegilops tauschii F775_42893 I 0.807
AMTR_s00011p00253850 Amborella trichopoda AMTR_s00011p00253850 I 0.811
AMTR_s00064p00107710 Amborella trichopoda AMTR_s00064p00107710 N 0.825
Aquca_007_00224 Aquilegia coerulea Aquca_007_00224 I 0.811
Aquca_010_00506 Aquilegia coerulea Aquca_010_00506 I 0.811
Aquca_020_00467 Aquilegia coerulea Aquca_020_00467 N 0.836
MNP Arabidopsis lyrata Al_scaffold_0005_1952 I 0.811
CGA1 Arabidopsis lyrata fgenesh2_kg.7__1630__AT4G26150.1 N 0.836
GATA19 Arabidopsis lyrata fgenesh2_kg.7__409__AT4G36620.1 I 0.811
GNC Arabidopsis lyrata fgenesh2_kg.8__1592__AT5G56860.1 N 0.836
GATA18 Arabidopsis thaliana AT3G50870 I 0.811
GATA22 Arabidopsis thaliana AT4G26150 N 0.836
GATA19 Arabidopsis thaliana AT4G36620 D 0.811
GATA21 Arabidopsis thaliana AT5G56860 N 0.836
Bostr.26833s0575 Boechera stricta Bostr.26833s0575 N 0.836
Bostr.6864s0159 Boechera stricta Bostr.6864s0159 I 0.811
Bostr.7867s0434 Boechera stricta Bostr.7867s0434 N 0.836
Bostr.7867s1518 Boechera stricta Bostr.7867s1518 I 0.811
BRADI1G37480 Brachypodium distachyon BRADI1G37480 N 0.825
BRADI2G14890 Brachypodium distachyon BRADI2G14890 I 0.807
BRADI2G45750 Brachypodium distachyon BRADI2G45750 I 0.811
BRADI3G08240 Brachypodium distachyon BRADI3G08240 N 0.825
Bo1g042950 Brassica oleracea Bo1g042950 N 0.836
Bo2g033970 Brassica oleracea Bo2g033970 N 0.836
Bo7g064860 Brassica oleracea Bo7g064860 I 0.811
Bo7g100580 Brassica oleracea Bo7g100580 I 0.811
Bo7g110740 Brassica oleracea Bo7g110740 N 0.836
Bo7g118030 Brassica oleracea Bo7g118030 I 0.811
Bo8g080330 Brassica oleracea Bo8g080330 I 0.811
Bo9g127360 Brassica oleracea Bo9g127360 N 0.836
Bra002788 Brassica rapa Bra002788 N 0.836
Bra006851 Brassica rapa Bra006851 I 0.867
Bra010563 Brassica rapa Bra010563 I 0.807
Bra012883 Brassica rapa Bra012883 I 0.811
Bra017766 Brassica rapa Bra017766 I 0.811
Bra019118 Brassica rapa Bra019118 N 0.836
Bra026461 Brassica rapa Bra026461 N 0.836
Bra035633 Brassica rapa Bra035633 N 0.836
Bra036854 Brassica rapa Bra036854 I 0.811
PK07593.1 Cannabis sativa PK07593.1 N 0.836
PK24471.1 Cannabis sativa PK24471.1 I 0.811
Cagra.0926s0051 Capsella grandiflora Cagra.0926s0051 I 0.811
Cagra.3467s0056 Capsella grandiflora Cagra.3467s0056 N 0.836
Cagra.4138s0005 Capsella grandiflora Cagra.4138s0005 N 0.836
Carubv10005113m.g Capsella rubella Carubv10005113m.g N 0.836
Carubv10007612m.g Capsella rubella Carubv10007612m.g I 0.811
Carubv10017765m.g Capsella rubella Carubv10017765m.g I 0.811
Carubv10026556m.g Capsella rubella Carubv10026556m.g N 0.836
evm.TU.supercontig_6.118 Carica papaya evm.TU.supercontig_6.118 I 0.811
evm.TU.supercontig_93.28 Carica papaya evm.TU.supercontig_93.28 N 0.836
Ca_02038 Cicer arietinum Ca_02038 I 0.811
Ca_16057 Cicer arietinum Ca_16057 I 0.811
Cla014810 Citrullus lanatus Cla014810 I 0.811
Cla021191 Citrullus lanatus Cla021191 N 0.825
Ciclev10008943m.g Citrus clementina Ciclev10008943m.g N 0.836
Ciclev10008968m.g Citrus clementina Ciclev10008968m.g N 0.836
Ciclev10009004m.g Citrus clementina Ciclev10009004m.g N 0.836
Ciclev10026328m.g Citrus clementina Ciclev10026328m.g I 0.811
orange1.1g020987m.g Citrus sinensis orange1.1g020987m.g N 0.836
orange1.1g021329m.g Citrus sinensis orange1.1g021329m.g N 0.836
orange1.1g021859m.g Citrus sinensis orange1.1g021859m.g N 0.836
Cucsa.106490 Cucumis sativus Cucsa.106490 I 0.811
Cucsa.353330 Cucumis sativus Cucsa.353330 N 0.825
Cucsa.397360 Cucumis sativus Cucsa.397360 N 0.836
Eucgr.C03048 Eucalyptus grandis Eucgr.C03048 N 0.836
Eucgr.C03895 Eucalyptus grandis Eucgr.C03895 N 0.836
Thhalv10010986m.g Eutrema salsugineum Thhalv10010986m.g I 0.811
Thhalv10013793m.g Eutrema salsugineum Thhalv10013793m.g N 0.836
Thhalv10025461m.g Eutrema salsugineum Thhalv10025461m.g N 0.836
Thhalv10027520m.g Eutrema salsugineum Thhalv10027520m.g I 0.811
gene02686-v1.0-hybrid Fragaria vesca gene02686-v1.0-hybrid N 0.831
gene12624-v1.0-hybrid Fragaria vesca gene12624-v1.0-hybrid N 0.836
gene14763-v1.0-hybrid Fragaria vesca gene14763-v1.0-hybrid I 0.811
GLYMA02G06320 Glycine max GLYMA02G06320 I 0.811
GLYMA04G05431 Glycine max GLYMA04G05431 N 0.825
GLYMA11G07350 Glycine max GLYMA11G07350 I 0.811
GLYMA13G00200 Glycine max GLYMA13G00200 N 0.836
GLYMA14G10830 Glycine max GLYMA14G10830 N 0.806
GLYMA16G25370 Glycine max GLYMA16G25370 I 0.811
GLYMA17G06290 Glycine max GLYMA17G06290 N 0.836
GLYMA17G34670 Glycine max GLYMA17G34670 N 0.820
Gorai.003G014300 Gossypium raimondii Gorai.003G014300 I 0.811
Gorai.007G202900 Gossypium raimondii Gorai.007G202900 I 0.811
Gorai.008G067800 Gossypium raimondii Gorai.008G067800 I 0.811
Gorai.009G031400 Gossypium raimondii Gorai.009G031400 N 0.836
Gorai.009G045000 Gossypium raimondii Gorai.009G045000 N 0.836
Gorai.010G082800 Gossypium raimondii Gorai.010G082800 N 0.836
Gorai.010G101100 Gossypium raimondii Gorai.010G101100 N 0.836
MLOC_10364 Hordeum vulgare MLOC_10364 N 0.825
MLOC_5372 Hordeum vulgare MLOC_5372 I 0.811
MLOC_62522 Hordeum vulgare MLOC_62522 I 0.807
LPERR01G21790 Leersia perrieri LPERR01G21790 I 0.811
LPERR02G07780 Leersia perrieri LPERR02G07780 N 0.825
LPERR05G21780 Leersia perrieri LPERR05G21780 I 0.811
LPERR05G22620 Leersia perrieri LPERR05G22620 I 0.807
Lus10028301.g Linum usitatissimum Lus10028301.g I 0.811
chr2.CM0249.1330.nc Lotus japonicus chr2.CM0249.1330.nc I 0.811
chr4.CM0244.740.nd Lotus japonicus chr4.CM0244.740.nd N 0.836
chr4.CM0283.270.nd Lotus japonicus chr4.CM0283.270.nd I 0.811
chr5.CM0019.380.nc Lotus japonicus chr5.CM0019.380.nc N 0.820
MDP0000131803 Malus domestica MDP0000131803 N 0.836
MDP0000190038 Malus domestica MDP0000190038 N 0.836
MDP0000237740 Malus domestica MDP0000237740 N 0.831
MDP0000253174 Malus domestica MDP0000253174 I 0.811
MDP0000310271 Malus domestica MDP0000310271 I 0.811
MDP0000739900 Malus domestica MDP0000739900 N 0.831
cassava21185.m1 Manihot esculenta cassava21185.m1 I 0.811
cassava32152.m1 Manihot esculenta cassava32152.m1 N 0.825
cassava33236.m1 Manihot esculenta cassava33236.m1 N 0.836
cassava43851.valid.m1 Manihot esculenta cassava43851.valid.m1 N 0.836
cassava5664.m1 Manihot esculenta cassava5664.m1 I 0.811
MTR_1g016170 Medicago truncatula MTR_1g016170 N 0.820
MTR_2g038720 Medicago truncatula MTR_2g038720 N 0.825
MTR_4g126350 Medicago truncatula MTR_4g126350 N 0.836
MTR_5g020230 Medicago truncatula MTR_5g020230 I 0.811
mgf008387m Mimulus guttatus mgf008387m N 0.825
mgf023982m Mimulus guttatus mgf023982m I 0.811
mgf025842m Mimulus guttatus mgf025842m N 0.825
GSMUA_Achr10G27510_001 Musa acuminata GSMUA_Achr10G27510_001 N 0.836
GSMUA_Achr2G16730_001 Musa acuminata GSMUA_Achr2G16730_001 I 0.822
GSMUA_Achr3G31070_001 Musa acuminata GSMUA_Achr3G31070_001 I 0.811
GSMUA_Achr4G30820_001 Musa acuminata GSMUA_Achr4G30820_001 N 0.836
GSMUA_Achr6G27250_001 Musa acuminata GSMUA_Achr6G27250_001 I 0.811
GSMUA_Achr7G09030_001 Musa acuminata GSMUA_Achr7G09030_001 I 0.867
GSMUA_Achr7G25620_001 Musa acuminata GSMUA_Achr7G25620_001 I 0.811
GSMUA_Achr8G24880_001 Musa acuminata GSMUA_Achr8G24880_001 N 0.812
OBART01G25510 Oryza barthii OBART01G25510 I 0.811
OBART02G08990 Oryza barthii OBART02G08990 N 0.825
OBART06G19060 Oryza barthii OBART06G19060 N 0.825
OB01G34710 Oryza brachyantha OB01G34710 I 0.811
OB02G18010 Oryza brachyantha OB02G18010 N 0.825
OB05G34480 Oryza brachyantha OB05G34480 I 0.811
OB06G26630 Oryza brachyantha OB06G26630 N 0.825
ORGLA01G0208300 Oryza glaberrima ORGLA01G0208300 I 0.811
ORGLA05G0226400 Oryza glaberrima ORGLA05G0226400 I 0.807
ORGLA05G0233700 Oryza glaberrima ORGLA05G0233700 I 0.807
ORGLA06G0158200 Oryza glaberrima ORGLA06G0158200 N 0.825
OGLUM01G29320 Oryza glumaepatula OGLUM01G29320 I 0.811
OGLUM02G09200 Oryza glumaepatula OGLUM02G09200 N 0.825
OGLUM05G28510 Oryza glumaepatula OGLUM05G28510 I 0.807
OGLUM06G20240 Oryza glumaepatula OGLUM06G20240 N 0.825
BGIOSGA001076 Oryza indica BGIOSGA001076 I 0.811
BGIOSGA006859 Oryza indica BGIOSGA006859 N 0.825
BGIOSGA017544 Oryza indica BGIOSGA017544 I 0.807
GATA15 Oryza indica BGIOSGA020424 I 0.807
BGIOSGA023117 Oryza indica BGIOSGA023117 N 0.825
BGIOSGA023119 Oryza indica BGIOSGA023119 N 0.825
OMERI01G23200 Oryza meridionalis OMERI01G23200 I 0.811
OMERI02G10250 Oryza meridionalis OMERI02G10250 N 0.825
OMERI03G30220 Oryza meridionalis OMERI03G30220 I 0.807
OMERI05G23010 Oryza meridionalis OMERI05G23010 I 0.807
ONIVA01G28750 Oryza nivara ONIVA01G28750 I 0.811
ONIVA05G29020 Oryza nivara ONIVA05G29020 I 0.807
ONIVA06G22870 Oryza nivara ONIVA06G22870 N 0.825
ONIVA11G03260 Oryza nivara ONIVA11G03260 N 0.825
OPUNC01G25380 Oryza punctata OPUNC01G25380 I 0.811
OPUNC02G08040 Oryza punctata OPUNC02G08040 N 0.825
OPUNC05G23750 Oryza punctata OPUNC05G23750 I 0.811
OPUNC05G24550 Oryza punctata OPUNC05G24550 I 0.807
OPUNC06G17260 Oryza punctata OPUNC06G17260 N 0.825
ORUFI01G28370 Oryza rufipogon ORUFI01G28370 I 0.811
ORUFI02G09020 Oryza rufipogon ORUFI02G09020 N 0.825
ORUFI05G28050 Oryza rufipogon ORUFI05G28050 I 0.807
ORUFI05G28920 Oryza rufipogon ORUFI05G28920 I 0.807
ORUFI06G20160 Oryza rufipogon ORUFI06G20160 N 0.825
OS01G0662800 Oryza sativa OS01G0662800 I 0.811
OS02G0220400 Oryza sativa OS02G0220400 N 0.825
OS05G0567900 Oryza sativa OS05G0567900 I 0.807
GATA15 Oryza sativa OS05G0578900 I 0.807
OS06G0571800 Oryza sativa OS06G0571800 N 0.825
Pavir.Aa02907 Panicum virgatum Pavir.Aa02907 N 0.825
Pavir.Ab00790 Panicum virgatum Pavir.Ab00790 N 0.825
Pavir.Ca00998 Panicum virgatum Pavir.Ca00998 I 0.807
Pavir.Da00760 Panicum virgatum Pavir.Da00760 N 0.825
Pavir.Db01250 Panicum virgatum Pavir.Db01250 N 0.825
Pavir.Ea02338 Panicum virgatum Pavir.Ea02338 I 0.807
Pavir.Eb02678 Panicum virgatum Pavir.Eb02678 I 0.811
Pavir.J03293 Panicum virgatum Pavir.J03293 I 0.811
Pavir.J18346 Panicum virgatum Pavir.J18346 I 0.807
Pavir.J26908 Panicum virgatum Pavir.J26908 I 0.811
POPTR_0005s12440 Populus trichocarpa POPTR_0005s12440 I 0.811
POPTR_0006s24560 Populus trichocarpa POPTR_0006s24560 N 0.836
POPTR_0007s12930 Populus trichocarpa POPTR_0007s12930 I 0.811
POPTR_0018s05160 Populus trichocarpa POPTR_0018s05160 N 0.836
Pm005502 Prunus mume Pm005502 N 0.820
Pm026628 Prunus mume Pm026628 I 0.811
Pm027164 Prunus mume Pm027164 N 0.836
PRUPE_ppa014930mg Prunus persica PRUPE_ppa014930mg I 0.811
PRUPE_ppa018120mg Prunus persica PRUPE_ppa018120mg N 0.820
PRUPE_ppa024374mg Prunus persica PRUPE_ppa024374mg N 0.836
29634.m002146 Ricinus communis 29634.m002146 I 0.811
29794.m003323 Ricinus communis 29794.m003323 N 0.836
29912.m005322 Ricinus communis 29912.m005322 N 0.836
SapurV1A.0086s0290 Salix purpurea SapurV1A.0086s0290 N 0.836
SapurV1A.0254s0200 Salix purpurea SapurV1A.0254s0200 I 0.811
SapurV1A.0978s0140 Salix purpurea SapurV1A.0978s0140 I 0.811
Si006733m.g Setaria italica Si006733m.g N 0.825
Si019058m.g Setaria italica Si019058m.g N 0.825
Si022366m.g Setaria italica Si022366m.g I 0.807
Si024214m.g Setaria italica Si024214m.g I 0.811
Solyc01g060490.2 Solanum lycopersicum Solyc01g060490.2 N 0.805
Solyc02g062760.2 Solanum lycopersicum Solyc02g062760.2 I 0.811
Solyc02g085190.1 Solanum lycopersicum Solyc02g085190.1 I 0.811
Solyc07g038160.2 Solanum lycopersicum Solyc07g038160.2 N 0.825
Solyc12g008830.1 Solanum lycopersicum Solyc12g008830.1 N 0.825
PGSC0003DMG400000280 Solanum tuberosum PGSC0003DMG400000280 N 0.825
PGSC0003DMG400003508 Solanum tuberosum PGSC0003DMG400003508 I 0.811
PGSC0003DMG400004493 Solanum tuberosum PGSC0003DMG400004493 N 0.825
PGSC0003DMG400015502 Solanum tuberosum PGSC0003DMG400015502 I 0.811
Sb03g030310 Sorghum bicolor Sb03g030310 I 0.811
Sb04g007750 Sorghum bicolor Sb04g007750 N 0.825
Sb09g028850 Sorghum bicolor Sb09g028850 I 0.807
Sb09g029510 Sorghum bicolor Sb09g029510 I 0.807
Sb10g022580 Sorghum bicolor Sb10g022580 N 0.825
TCM_000376 Theobroma cacao TCM_000376 I 0.811
TCM_037285 Theobroma cacao TCM_037285 N 0.836
TCM_037666 Theobroma cacao TCM_037666 N 0.836
Traes_1AL_A1EA76E83 Triticum aestivum Traes_1AL_A1EA76E83 I 0.807
TRAES3BF091700010CFD_g Triticum aestivum TRAES3BF091700010CFD_g I 0.811
Traes_6AS_1BF0823061 Triticum aestivum Traes_6AS_1BF0823061 N 0.825
Traes_6AS_1BF082306 Triticum aestivum Traes_6AS_1BF082306 N 0.825
Traes_6BS_4EA352A7A Triticum aestivum Traes_6BS_4EA352A7A N 0.820
Traes_6DS_77038429A Triticum aestivum Traes_6DS_77038429A N 0.825
Traes_7BL_86BB5C61E Triticum aestivum Traes_7BL_86BB5C61E N 0.825
Traes_7DL_BFADB408C Triticum aestivum Traes_7DL_BFADB408C N 0.825
VIT_04s0008g01290 Vitis vinifera VIT_04s0008g01290 N 0.836
MNP Vitis vinifera VIT_04s0023g01840 I 0.811
VIT_11s0016g02210 Vitis vinifera VIT_11s0016g02210 N 0.836
GRMZM2G031983 Zea mays GRMZM2G031983 N 0.836
GRMZM2G039586 Zea mays GRMZM2G039586 N 0.825
GRMZM2G123909 Zea mays GRMZM2G123909 I 0.811