CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CSUB01_05993
(
Colletotrichum sublineola
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
CSUB01_05993
T192414_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-2
M02016_2.00
Neurospora crassa
NNHGATNNN
NNNATCDNN
PBM
Weirauch et al.(2014)
pTH8611
0.867
1.000
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KDN68247
GATA
402
437
CTDCGTLDSPEWRKGPSGPKTLCNACGLRWAKKEKK
Links
Other
GATA
family TFs
Other
Colletotrichum sublineola
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIS002444
Anopheles sinensis
ASIS002444
N
0.000
BGIBMGA006156
Bombyx mori
BGIBMGA006156
N
0.000
Bra012832
Brassica rapa
Bra012832
N
0.000
Ca_10726
Cicer arietinum
Ca_10726
N
0.000
Cla010647
Citrullus lanatus
Cla010647
N
0.000
UCREL1_5722
Eutypa lata
UCREL1_5722
N
0.000
GLYMA16G22060
Glycine max
GLYMA16G22060
I
0.000
HelroG178674
Helobdella robusta
HelroG178674
N
0.000
JAAARDRAFT_460099
Jaapia argillacea
JAAARDRAFT_460099
N
0.000
Lus10013219.g
Linum usitatissimum
Lus10013219.g
N
0.000
Lus10016695.g
Linum usitatissimum
Lus10016695.g
N
0.000
Lus10027787.g
Linum usitatissimum
Lus10027787.g
N
0.000
Lus10035991.g
Linum usitatissimum
Lus10035991.g
N
0.000
LCUP017801
Lucilia cuprina
LCUP017801
N
0.000
MDP0000699531
Malus domestica
MDP0000699531
N
0.000
OBART09G18880
Oryza barthii
OBART09G18880
N
0.000
OGLUM09G19410
Oryza glumaepatula
OGLUM09G19410
N
0.000
BGIOSGA031227
Oryza indica
BGIOSGA031227
N
0.000
OLONG_009629
Oryza longistaminata
OLONG_009629
N
0.000
OPUNC09G17310
Oryza punctata
OPUNC09G17310
N
0.000
fgenesh1_pg.C_scaffold_10000369
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_10000369
N
0.000
SCHCODRAFT_110960
Schizophyllum commune
SCHCODRAFT_110960
N
0.000
SINV25043
Solenopsis invicta
SINV25043
N
0.000
TSTA_110260
Talaromyces stipitatus
TSTA_110260
N
0.000
M407DRAFT_45069
Tulasnella calospora
M407DRAFT_45069
N
0.000