CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OB07G25870
(
Oryza brachyantha
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OB07G25870
T200611_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB07G25870.1
GRAS
175
545
LKELLIACARAVEEKNSFAIDLMITELRKMVSVSGEPLERLGAYMVEGLVARLASSGSSIYKALKCKEPKSSDLLSYMHFLYEACPYFKFGYMSANGAIAEAVKGEDRIHIIDFHISQGAQWISLLQALAARPGGPPTVRITGIDDSVSAYARGGGLELVGRRLSHIAGLCKVPFEFHPLAISGSQVEEAHLGVLPGEAVAVNFTLELHHVPDESVSTANHRDRLLRMVKGLSPRVLTLVEMESNTNTAPFTQRFAETLDYYTAIFESIDLTLPRDDRERINMEQHCLAREIVNLVACEGEERAERYEPFGKWKARLTMAGLRPSPLSSLVNATIRTLLQSYSDDYKLAERDGALYLGWKNRPLVVSSAWH
Links
Other
GRAS
family TFs
Other
Oryza brachyantha
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_15940
Aegilops tauschii
F775_15940
N
0.835
F775_28371
Aegilops tauschii
F775_28371
N
0.878
Aquca_005_00234
Aquilegia coerulea
Aquca_005_00234
N
0.705
BRADI1G23350
Brachypodium distachyon
BRADI1G23350
N
0.894
evm.TU.supercontig_12.194
Carica papaya
evm.TU.supercontig_12.194
N
0.702
gene21592-v1.0-hybrid
Fragaria vesca
gene21592-v1.0-hybrid
N
0.710
GLYMA02G47640
Glycine max
GLYMA02G47640
N
0.702
Gorai.001G192800
Gossypium raimondii
Gorai.001G192800
N
0.702
Gorai.007G167000
Gossypium raimondii
Gorai.007G167000
N
0.705
MLOC_65838
Hordeum vulgare
MLOC_65838
N
0.886
LPERR07G17460
Leersia perrieri
LPERR07G17460
N
0.951
MDP0000152670
Malus domestica
MDP0000152670
N
0.707
MDP0000804652
Malus domestica
MDP0000804652
N
0.705
cassava10826.m1
Manihot esculenta
cassava10826.m1
N
0.705
cassava34699.m1
Manihot esculenta
cassava34699.m1
N
0.713
OBART07G20130
Oryza barthii
OBART07G20130
N
0.951
ORGLA07G0258500
Oryza glaberrima
ORGLA07G0258500
N
0.954
OGLUM07G19910
Oryza glumaepatula
OGLUM07G19910
N
0.954
BGIOSGA026022
Oryza indica
BGIOSGA026022
N
0.954
OMERI07G16830
Oryza meridionalis
OMERI07G16830
N
0.959
ONIVA07G18570
Oryza nivara
ONIVA07G18570
N
0.954
OPUNC07G19030
Oryza punctata
OPUNC07G19030
N
0.965
ORUFI07G20980
Oryza rufipogon
ORUFI07G20980
N
0.954
CIGR2
Oryza sativa
OS07G0583600
N
0.954
Pavir.Ba00562
Panicum virgatum
Pavir.Ba00562
N
0.905
Pavir.Bb03224
Panicum virgatum
Pavir.Bb03224
N
0.885
PDK_20s1411471g003
Phoenix dactylifera
PDK_20s1411471g003
N
0.729
Pm012019
Prunus mume
Pm012019
N
0.705
Pm015021
Prunus mume
Pm015021
N
0.713
PRUPE_ppa003702mg
Prunus persica
PRUPE_ppa003702mg
N
0.718
27613.m000642
Ricinus communis
27613.m000642
N
0.724
Si029418m.g
Setaria italica
Si029418m.g
N
0.900
Solyc07g047950.1
Solanum lycopersicum
Solyc07g047950.1
N
0.702
PGSC0003DMG400006132
Solanum tuberosum
PGSC0003DMG400006132
N
0.702
Sb02g037650
Sorghum bicolor
Sb02g037650
N
0.897
TCM_030733
Theobroma cacao
TCM_030733
N
0.717
TCM_002319
Theobroma cacao
TCM_002319
N
0.710
Traes_5DL_B89CD8432
Triticum aestivum
Traes_5DL_B89CD8432
N
0.832
Traes_2BS_D007D6598
Triticum aestivum
Traes_2BS_D007D6598
N
0.878
Traes_2DS_CCA2FCCAD
Triticum aestivum
Traes_2DS_CCA2FCCAD
N
0.881
Traes_5BL_1E751EF1F
Triticum aestivum
Traes_5BL_1E751EF1F
N
0.726
Traes_5BL_A7C4DAE11
Triticum aestivum
Traes_5BL_A7C4DAE11
N
0.835
GRMZM2G431309
Zea mays
GRMZM2G431309
N
0.894
GRMZM2G098517
Zea mays
GRMZM2G098517
N
0.878