CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM12G02750
(
Oryza glumaepatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OGLUM12G02750
T200738_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM12G02750.1
GRAS
167
547
LRELLMSCAQAVASGNRRSAGELLEQIKRHSSPTGDATERLAHYFADGLEARLAGAASLEHRLLASAEERASAMELLEAYQVFMAACCFKWVAFTFANMAILRAAEGRSKVHIVDYGGQYHGLQWPSLLQRLAEREGGPPEVRMTLVGHPQPGFRPARRLERTGRRLSNCARAFGLPFKFRAVAAARWETVTAEDVVGVDPDEAAVVVNDVLSLGTLMDESGVFDDPSPRDTVLGSIRDMRPAVFVQAVVNGAHGAPFFPTRFREALFFFSALFDMLDATTPEEGSHLRAVLERDVLRRAVVGVIAGEGAERVERPETYRRWQARNRRAGLRQVAVEADVVEAVRRRVRRRHHEEFVIEEDAGWLLQGWKGRILYAHSAWV
Links
Other
GRAS
family TFs
Other
Oryza glumaepatula
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10027926m.g
Citrus clementina
Ciclev10027926m.g
N
Ciclev10027940m.g
Citrus clementina
Ciclev10027940m.g
N
orange1.1g045051m.g
Citrus sinensis
orange1.1g045051m.g
N
Gorai.003G130400
Gossypium raimondii
Gorai.003G130400
N
cassava34369.m1
Manihot esculenta
cassava34369.m1
N
POPTR_0001s24890
Populus trichocarpa
POPTR_0001s24890
N
POPTR_0009s03850
Populus trichocarpa
POPTR_0009s03850
N
Pm000713
Prunus mume
Pm000713
N
PRUPE_ppa002166mg
Prunus persica
PRUPE_ppa002166mg
N
PRUPE_ppa002472mg
Prunus persica
PRUPE_ppa002472mg
N
PRUPE_ppa019574mg
Prunus persica
PRUPE_ppa019574mg
N
PRUPE_ppa026849mg
Prunus persica
PRUPE_ppa026849mg
N
28650.m000187
Ricinus communis
28650.m000187
N
SapurV1A.0040s0520
Salix purpurea
SapurV1A.0040s0520
N
SapurV1A.0041s0200
Salix purpurea
SapurV1A.0041s0200
N
TCM_041810
Theobroma cacao
TCM_041810
N