CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA11G01600
(
Oryza nivara
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
ONIVA11G01600
T200868_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA11G01600.1
GRAS
1
211
MEALEATGKRLSDFADTLGLPFEFCPVADKAGNLDPEKLGVTRREAVAVHWLRHSLYDVTGSDSNTLWLIQRLAPKVVTMVEQDLSHSGSFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVKFGSWREKLAQSGFRVSSLAGSAAAQAALLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAWR
Links
Other
GRAS
family TFs
Other
Oryza nivara
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCR
Arabidopsis lyrata
fgenesh2_kg.5__1811__AT3G54220.1
N
0.806
SCR
Arabidopsis thaliana
AT3G54220
N
0.806
Bostr.0697s0034
Boechera stricta
Bostr.0697s0034
N
0.806
BRADI4G44090
Brachypodium distachyon
BRADI4G44090
N
0.794
PK22310.1
Cannabis sativa
PK22310.1
N
0.821
Cagra.0562s0013
Capsella grandiflora
Cagra.0562s0013
N
0.806
Carubv10016802m.g
Capsella rubella
Carubv10016802m.g
N
0.806
evm.TU.supercontig_1018.1
Carica papaya
evm.TU.supercontig_1018.1
N
0.815
Ca_09530
Cicer arietinum
Ca_09530
N
0.801
Cla012346
Citrullus lanatus
Cla012346
N
0.796
GLYMA18G45220
Glycine max
GLYMA18G45220
N
0.820
MLOC_79758
Hordeum vulgare
MLOC_79758
N
0.915
LPERR11G01220
Leersia perrieri
LPERR11G01220
N
1.000
chr1.CM1255.400.nc
Lotus japonicus
chr1.CM1255.400.nc
N
0.820
mgf012242m
Mimulus guttatus
mgf012242m
N
0.787
GSMUA_Achr8G09400_001
Musa acuminata
GSMUA_Achr8G09400_001
N
0.867
OB07G24850
Oryza brachyantha
OB07G24850
N
0.719
OGLUM12G01020
Oryza glumaepatula
OGLUM12G01020
N
0.995
OPUNC11G01240
Oryza punctata
OPUNC11G01240
N
1.000
ORUFI11G01380
Oryza rufipogon
ORUFI11G01380
N
0.995
OS07G0567700
Oryza sativa
OS07G0567700
N
0.719
Pavir.J19041
Panicum virgatum
Pavir.J19041
N
0.944
Pavir.J21588
Panicum virgatum
Pavir.J21588
N
0.916
Traes_5DL_3EC609F62
Triticum aestivum
Traes_5DL_3EC609F62
N
0.792
Traes_5BL_C02570726
Triticum aestivum
Traes_5BL_C02570726
N
0.919
TRIUR3_28106
Triticum urartu
TRIUR3_28106
N
0.720
GRMZM2G131516
Zea mays
GRMZM2G131516
N
0.962