CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Cb02147
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.Cb02147
T202987_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Cb02147.1.p
GRAS
44
490
LIGLLYQCAGEVAAGAFDRANHCLEQITQVASLDAPHTLQRLAAVFADALARKLLNLVPGLSRALLSTSNSAEAHLIPAARRHLFDMLPFMKLAYLTTNHAILEAMEGEKFVHVVDLSGPASNPVQWIALFHAFRARRGGPPHLRITAVHDDKEFLANMAGALAKDAEALDIPFQFSAVEARLDDLDPDALRQLLRVRSGEALAISVVAQLHRLLAADDAGRRHVPGSSCLTPVQIIARSSPSSFGELLERELNTRLQLSPDASSVVSSLSPQSPVLQAAAQQQQRPAAAKLGSFLQAVRALSPKIMVVAEPEANHNAAAFLERFEEALNYYASLFDCLERASAAHRCAAERARVERLVLGEEVRGVVAREGAERKERHERLAQWARRMEAAGMERVGMSYGGMMEARKLLRSLGWGGSYEVVHDARGEAFFFCWHRRPLYSVSAWR
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_10384
Aspergillus nidulans
CADANIAG00009867
N
CFIO01_00410
Colletotrichum fioriniae
CFIO01_00410
N
FVEG_13272
Fusarium verticillioides
FVEG_13272
N
NEUTE1DRAFT_149656
Neurospora tetrasperma
NEUTE1DRAFT_149656
N
M407DRAFT_28481
Tulasnella calospora
M407DRAFT_28481
N
VDAG_02347
Verticillium dahliae
VDAG_02347
N
VDAG_10120
Verticillium dahliae
VDAG_10120
N