CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0451s0060
(
Salix purpurea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
SapurV1A.0451s0060
T203156_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0451s0060.1.p
GRAS
368
739
LRTLLTLCAQAVAADDRRSANDLLKQIRQNSPPTGDAMQSLANIFADGLEARLAGSGTQIYKALISKPTSAADVLKAYHMFLAACPFRKLSNFFSNKTIMNIAENATKVHIVDFGILYGFQWPCLIQRLSSRPGGPPHLRITGIDLPNPGFRPAERVEETGRRLANYANTFKVPFEFKAIAQKWDTIKIEDLKIDRNEVLVVNSLYRLRNLLDETVVVESPRNIVLNLIRNMNPDVFIQGVVNGAYNAPFFITRFREALFHFSTLFDVLEANVSREVPERMLIEREIFGWEAMNVIACEGAERIERPETYKQWQMWILRAGFRQLPLNQEIYMTAKEKVEARYHKDFVIDEDSHWLLQGWKGRIVYALSSWK
SapurV1A.0451s0060.2.p
GRAS
368
739
LRTLLTLCAQAVAADDRRSANDLLKQIRQNSPPTGDAMQSLANIFADGLEARLAGSGTQIYKALISKPTSAADVLKAYHMFLAACPFRKLSNFFSNKTIMNIAENATKVHIVDFGILYGFQWPCLIQRLSSRPGGPPHLRITGIDLPNPGFRPAERVEETGRRLANYANTFKVPFEFKAIAQKWDTIKIEDLKIDRNEVLVVNSLYRLRNLLDETVVVESPRNIVLNLIRNMNPDVFIQGVVNGAYNAPFFITRFREALFHFSTLFDVLEANVSREVPERMLIEREIFGWEAMNVIACEGAERIERPETYKQWQMWILRAGFRQLPLNQEIYMTAKEKVEARYHKDFVIDEDSHWLLQGWKGRIVYALSSWK
SapurV1A.0451s0060.3.p
GRAS
368
739
LRTLLTLCAQAVAADDRRSANDLLKQIRQNSPPTGDAMQSLANIFADGLEARLAGSGTQIYKALISKPTSAADVLKAYHMFLAACPFRKLSNFFSNKTIMNIAENATKVHIVDFGILYGFQWPCLIQRLSSRPGGPPHLRITGIDLPNPGFRPAERVEETGRRLANYANTFKVPFEFKAIAQKWDTIKIEDLKIDRNEVLVVNSLYRLRNLLDETVVVESPRNIVLNLIRNMNPDVFIQGVVNGAYNAPFFITRFREALFHFSTLFDVLEANVSREVPERMLIEREIFGWEAMNVIACEGAERIERPETYKQWQMWILRAGFRQLPLNQEIYMTAKEKVEARYHKDFVIDEDSHWLLQGWKGRIVYALSSWK
SapurV1A.0451s0060.4.p
GRAS
368
739
LRTLLTLCAQAVAADDRRSANDLLKQIRQNSPPTGDAMQSLANIFADGLEARLAGSGTQIYKALISKPTSAADVLKAYHMFLAACPFRKLSNFFSNKTIMNIAENATKVHIVDFGILYGFQWPCLIQRLSSRPGGPPHLRITGIDLPNPGFRPAERVEETGRRLANYANTFKVPFEFKAIAQKWDTIKIEDLKIDRNEVLVVNSLYRLRNLLDETVVVESPRNIVLNLIRNMNPDVFIQGVVNGAYNAPFFITRFREALFHFSTLFDVLEANVSREVPERMLIEREIFGWEAMNVIACEGAERIERPETYKQWQMWILRAGFRQLPLNQEIYMTAKEKVEARYHKDFVIDEDSHWLLQGWKGRIVYALSSWK
SapurV1A.0451s0060.5.p
GRAS
301
672
LRTLLTLCAQAVAADDRRSANDLLKQIRQNSPPTGDAMQSLANIFADGLEARLAGSGTQIYKALISKPTSAADVLKAYHMFLAACPFRKLSNFFSNKTIMNIAENATKVHIVDFGILYGFQWPCLIQRLSSRPGGPPHLRITGIDLPNPGFRPAERVEETGRRLANYANTFKVPFEFKAIAQKWDTIKIEDLKIDRNEVLVVNSLYRLRNLLDETVVVESPRNIVLNLIRNMNPDVFIQGVVNGAYNAPFFITRFREALFHFSTLFDVLEANVSREVPERMLIEREIFGWEAMNVIACEGAERIERPETYKQWQMWILRAGFRQLPLNQEIYMTAKEKVEARYHKDFVIDEDSHWLLQGWKGRIVYALSSWK
Links
Other
GRAS
family TFs
Other
Salix purpurea
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_009_00954
Aquilegia coerulea
Aquca_009_00954
N
0.724
evm.TU.supercontig_1.422
Carica papaya
evm.TU.supercontig_1.422
N
0.786
Ca_21138
Cicer arietinum
Ca_21138
N
0.703
Cla018179
Citrullus lanatus
Cla018179
N
0.722
Ciclev10011141m.g
Citrus clementina
Ciclev10011141m.g
N
0.708
Ciclev10030787m.g
Citrus clementina
Ciclev10030787m.g
N
0.827
orange1.1g004514m.g
Citrus sinensis
orange1.1g004514m.g
N
0.708
orange1.1g004488m.g
Citrus sinensis
orange1.1g004488m.g
N
0.830
Cucsa.175500
Cucumis sativus
Cucsa.175500
N
0.711
Eucgr.G02939
Eucalyptus grandis
Eucgr.G02939
N
0.757
Eucgr.G02940
Eucalyptus grandis
Eucgr.G02940
N
0.717
Eucgr.G02941
Eucalyptus grandis
Eucgr.G02941
N
0.732
GLYMA18G39920
Glycine max
GLYMA18G39920
N
0.710
GLYMA07G15950
Glycine max
GLYMA07G15950
N
0.702
Gorai.010G201000
Gossypium raimondii
Gorai.010G201000
N
0.808
Gorai.011G266200
Gossypium raimondii
Gorai.011G266200
N
0.846
Lus10023404.g
Linum usitatissimum
Lus10023404.g
N
0.822
Lus10024384.g
Linum usitatissimum
Lus10024384.g
N
0.703
Lus10040284.g
Linum usitatissimum
Lus10040284.g
N
0.822
cassava31335.valid.m1
Manihot esculenta
cassava31335.valid.m1
N
0.849
cassava15723.m1
Manihot esculenta
cassava15723.m1
N
0.827
MTR_7g062120
Medicago truncatula
MTR_7g062120
N
0.700
mgf014897m
Mimulus guttatus
mgf014897m
N
0.765
PDK_20s1329542g002
Phoenix dactylifera
PDK_20s1329542g002
N
0.712
POPTR_0006s08690
Populus trichocarpa
POPTR_0006s08690
N
0.714
POPTR_0008s05750
Populus trichocarpa
POPTR_0008s05750
N
0.949
XM_002316242.1
Populus trichocarpa
POPTR_0010s20980
N
0.881
Pm018822
Prunus mume
Pm018822
N
0.768
Pm002685
Prunus mume
Pm002685
N
0.741
PRUPE_ppa001883mg
Prunus persica
PRUPE_ppa001883mg
N
0.738
PRUPE_ppa021438mg
Prunus persica
PRUPE_ppa021438mg
N
0.768
27568.m000253
Ricinus communis
27568.m000253
N
0.854
29767.m000200
Ricinus communis
29767.m000200
N
0.702
SapurV1A.0001s1700
Salix purpurea
SapurV1A.0001s1700
N
0.714
Solyc05g053090.1
Solanum lycopersicum
Solyc05g053090.1
N
0.738
Solyc04g011630.1
Solanum lycopersicum
Solyc04g011630.1
N
0.749
Solyc09g010920.1
Solanum lycopersicum
Solyc09g010920.1
N
0.700
PGSC0003DMG400027198
Solanum tuberosum
PGSC0003DMG400027198
N
0.741
PGSC0003DMG400006352
Solanum tuberosum
PGSC0003DMG400006352
N
0.764
TCM_021920
Theobroma cacao
TCM_021920
N
0.700
TCM_042705
Theobroma cacao
TCM_042705
N
0.849
VIT_08s0007g00510
Vitis vinifera
VIT_08s0007g00510
N
0.738
VIT_13s0019g01700
Vitis vinifera
VIT_13s0019g01700
N
0.737
VIT_13s0019g01710
Vitis vinifera
VIT_13s0019g01710
N
0.705
VIT_13s0019g01810
Vitis vinifera
VIT_13s0019g01810
N
0.765