OBART05G11630 (Oryza barthii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OBART05G11630 T221335_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART05G11630.1 Homeodomain 47 96
OBART05G11630.2 Homeodomain 47 96

Links

Other Homeodomain family TFs
Other Oryza barthii TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_603934.1 Arabidopsis lyrata scaffold_603934.1 N 0.678
Bo9g006410 Brassica oleracea Bo9g006410 N 0.669
gene14635-v1.0-hybrid Fragaria vesca gene14635-v1.0-hybrid N 0.653
GLYMA08G38930 Glycine max GLYMA08G38930 N 0.671
Gorai.013G254100 Gossypium raimondii Gorai.013G254100 I 0.649
Gorai.004G014700 Gossypium raimondii Gorai.004G014700 I 0.679
LjSGA_012738.1 Lotus japonicus LjSGA_012738.1 N 0.665
cassava31027.valid.m1 Manihot esculenta cassava31027.valid.m1 N 0.670
GSMUA_Achr9G06610_001 Musa acuminata GSMUA_Achr9G06610_001 N 0.822
GSMUA_Achr8G27210_001 Musa acuminata GSMUA_Achr8G27210_001 N 0.822
OBART01G26120 Oryza barthii OBART01G26120 N 0.822
OB01G35260 Oryza brachyantha OB01G35260 N 0.822
BGIOSGA019617 Oryza indica BGIOSGA019617 N 0.838
OLONG_014924 Oryza longistaminata OLONG_014924 N 0.822
ONIVA05G12010 Oryza nivara ONIVA05G12010 N 0.838
ORUFI05G12600 Oryza rufipogon ORUFI05G12600 N 0.738
POPTR_0004s04840 Populus trichocarpa POPTR_0004s04840 N 0.828
Pm012761 Prunus mume Pm012761 N 0.679
SapurV1A.0042s0570 Salix purpurea SapurV1A.0042s0570 I 0.649
PGSC0003DMG400004714 Solanum tuberosum PGSC0003DMG400004714 I 0.650
TCM_008214 Theobroma cacao TCM_008214 I 0.774