ONIVA10G18590 (Oryza nivara)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ONIVA10G18590 T221695_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.735 0.658
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.659 0.500
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.659 0.500
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.659 0.500
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.659 0.500
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.609 0.526
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA10G18590.1 Homeodomain 361 399

Links

Other Homeodomain family TFs
Other Oryza nivara TFs

1001 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.9__81__AT4G12850.1 Arabidopsis lyrata fgenesh2_kg.9__81__AT4G12850.1 N 0.000
AT4G12850 Arabidopsis thaliana AT4G12850 N 0.000
Bostr.2021s0020 Boechera stricta Bostr.2021s0020 N 0.000
PK06282.1 Cannabis sativa PK06282.1 N 0.000
PK01836.1 Cannabis sativa PK01836.1 N 0.000
Ca_17053 Cicer arietinum Ca_17053 N 0.000
Ciclev10016721m.g Citrus clementina Ciclev10016721m.g N 0.000
Ciclev10022249m.g Citrus clementina Ciclev10022249m.g N 0.000
orange1.1g030575m.g Citrus sinensis orange1.1g030575m.g N 0.000
orange1.1g030419m.g Citrus sinensis orange1.1g030419m.g N 0.000
Cucsa.388460 Cucumis sativus Cucsa.388460 N 0.000
Eucgr.H00706 Eucalyptus grandis Eucgr.H00706 N 0.000
GLYMA08G45680 Glycine max GLYMA08G45680 N 0.000
GLYMA18G24443 Glycine max GLYMA18G24443 N 0.000
Gorai.005G128700 Gossypium raimondii Gorai.005G128700 N 0.000
Gorai.001G227800 Gossypium raimondii Gorai.001G227800 N 0.000
cassava19693.m1 Manihot esculenta cassava19693.m1 N 0.000
mgf019147m Mimulus guttatus mgf019147m N 0.000
POPTR_0002s24040 Populus trichocarpa POPTR_0002s24040 N 0.000
POPTR_0014s17510 Populus trichocarpa POPTR_0014s17510 N 0.000
POPTR_0017s05820 Populus trichocarpa POPTR_0017s05820 N 0.000
PRUPE_ppa019053mg Prunus persica PRUPE_ppa019053mg N 0.000
30178.m000863 Ricinus communis 30178.m000863 N 0.000
29569.m000148 Ricinus communis 29569.m000148 N 0.000
SapurV1A.0071s0660 Salix purpurea SapurV1A.0071s0660 N 0.000
TCM_020035 Theobroma cacao TCM_020035 N 0.000
TCM_002653 Theobroma cacao TCM_002653 N 0.000