Si040014m.g (Setaria italica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Si040014m.g T223256_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_gwp_gw1.C_70211
M02220_2.00 		Physcomitrella patens
HMATNANDNN
NNHNTNATKD		 PBM
Weirauch et al.(2014)
pTH8489 		0.844 0.750
ATHB-13
M06900_2.00 		Arabidopsis thaliana
HYAATAATTDD
HHAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB13_col_a 		0.821 0.679
ATHB-13
M06901_2.00 		Arabidopsis thaliana
NYAATAATTRW
WYAATTATTRN		 Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a 		0.821 0.679
ATHB-16
M02050_2.00 		Arabidopsis thaliana
YAATMATT
AATKATTR		 PBM
Weirauch et al.(2014)
pTH7270 		0.807 0.732
ATHB-6
M02040_2.00 		Arabidopsis thaliana
HATNATTDN
NHAATNATD		 PBM
Weirauch et al.(2014)
pTH7670 		0.807 0.714
ATHB-6
M06909_2.00 		Arabidopsis thaliana
NNNHATKATTR
YAATMATDNNN		 Dap-seq
OMalley et al.(2016)
ATHB6_col_a 		0.807 0.714
ATHB-6
M06910_2.00 		Arabidopsis thaliana
NCAATAATTRN
NYAATTATTGN		 Dap-seq
OMalley et al.(2016)
ATHB6_colamp_a 		0.807 0.714
HAT5
M06914_2.00 		Arabidopsis thaliana
NHAATAATTDW
WHAATTATTDN		 Dap-seq
OMalley et al.(2016)
HAT5_col_a 		0.807 0.714
HAT5
M06915_2.00 		Arabidopsis thaliana
WNYAATAATTRWDN
NHWYAATTATTRNW		 Dap-seq
OMalley et al.(2016)
HAT5_colamp_a 		0.807 0.714
HAT5
M02683_2.00 		Arabidopsis thaliana
SCAATAATTNNV
BNNAATTATTGS		 SELEX
Mathelier et al.(2014)
MA0008.2 		0.807 0.714
HAT5
M10624_2.00 		Arabidopsis thaliana
YSCAATAATTNNVN
NBNNAATTATTGSR		 Transfac
Matys et al.(2006)
P$ATHB1_01 		0.807 0.714
ATHB-5
M06932_2.00 		Arabidopsis thaliana
NYAATMATTND
HNAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_col_a 		0.789 0.714
ATHB-5
M06933_2.00 		Arabidopsis thaliana
NYAATMATTN
NAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a 		0.789 0.714
ATHB-5
M02684_2.00 		Arabidopsis thaliana
CAATVATTGVVSV
BSBBCAATBATTG		 SELEX
Mathelier et al.(2014)
MA0110.2 		0.789 0.714
ATHB-5
M10630_2.00 		Arabidopsis thaliana
CAATVATTG
CAATBATTG		 Transfac
Matys et al.(2006)
P$ATHB5_01 		0.789 0.714
ATHB-53
M06934_2.00 		Arabidopsis thaliana
HMAATAATTRD
HYAATTATTKD		 Dap-seq
OMalley et al.(2016)
ATHB53_col_a 		0.752 0.589
ATHB-53
M06935_2.00 		Arabidopsis thaliana
NNWHCAATWATTDDN
NHHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB53_colamp_a 		0.752 0.589
ATHB-21
M06907_2.00 		Arabidopsis thaliana
NNWHCAATWATTDN
NHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB21_col_a 		0.750 0.661
ATHB-21
M06908_2.00 		Arabidopsis thaliana
WWDDNNNHAATWATTGDTNN
NNAHCAATWATTDNNNHHWW		 Dap-seq
OMalley et al.(2016)
ATHB21_colamp_a 		0.750 0.661
HB-5
M06924_2.00 		Arabidopsis thaliana
NNAHCAATWATTKDNNNHWWH
DWWDNNNHMAATWATTGDTNN		 Dap-seq
OMalley et al.(2016)
ATHB40_col_a 		0.747 0.607
HB-5
M06925_2.00 		Arabidopsis thaliana
HHAATWATTGDWNN
NNWHCAATWATTDD		 Dap-seq
OMalley et al.(2016)
ATHB40_colamp_a 		0.747 0.607
PK20392.1
M01250_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11331 		0.682 0.679
PK20392.1
M01251_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11332 		0.682 0.679
ATHB-20
M06912_2.00 		Arabidopsis thaliana
HYAATAATTRD
HYAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_col_a 		0.662 0.661
ATHB-20
M06913_2.00 		Arabidopsis thaliana
HYAATMATTRD
HYAATKATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a 		0.662 0.661
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si040014m Homeodomain 96 151

Links

Other Homeodomain family TFs
Other Setaria italica TFs

801 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g00430 Acanthocheilonema viteae nAv.1.0.1.g00430 I
ACYPI000365 Acyrthosiphon pisum ACYPI000365 I
ACYPI005550 Acyrthosiphon pisum ACYPI005550 I
AAEL013896 Aedes aegypti AAEL013896 I
ANCCAN_20978 Ancylostoma caninum ANCCAN_20978 I
ANCCAN_20979 Ancylostoma caninum ANCCAN_20979 N
ANCCEY_04158 Ancylostoma ceylanicum ANCCEY_04158 N
ANCDUO_23180 Ancylostoma duodenale ANCDUO_23180 N
ACOC_0000990601 Angiostrongylus costaricensis ACOC_0000990601 N
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I
AALB009485 Anopheles albimanus AALB009485 I
AARA004719 Anopheles arabiensis AARA004719 I
AATE010695 Anopheles atroparvus AATE010695 I
ACHR000067 Anopheles christyi ACHR000067 I
ACOM037505 Anopheles coluzzii ACOM037505 I
ACUA025512 Anopheles culicifacies ACUA025512 I
ADAC007516 Anopheles darlingi ADAC007516 I
ADIR002761 Anopheles dirus ADIR002761 I
AEPI002385 Anopheles epiroticus AEPI002385 I
AFAF011208 Anopheles farauti AFAF011208 I
AFUN009864 Anopheles funestus AFUN009864 I
AGAP002902 Anopheles gambiae AGAP002902 I
AMAM019778 Anopheles maculatus AMAM019778 I
AMEC018109 Anopheles melas AMEC018109 I
AMEM015931 Anopheles merus AMEM015931 I
AMIN000723 Anopheles minimus AMIN000723 I
AQUA009305 Anopheles quadriannulatus AQUA009305 I
ASTEI00079 Anopheles stephensi ASTEI00079 I
GB50071 Apis mellifera GB50071 I
ASU_13433 Ascaris suum ASU_13433 I
BGIBMGA010110 Bombyx mori BGIBMGA010110 I
Bm3575 Brugia malayi Bm3575 I
BTMF_0000404601 Brugia timori BTMF_0000404601 I
Cflo_07183--XP_392838.3_APIME Camponotus floridanus Cflo_07183--XP_392838.3_APIME I
CLEC002594 Cimex lectularius CLEC002594 I
CGI_10018464 Crassostrea gigas CGI_10018464 I
CpipJ_CPIJ002563 Culex pipiens CpipJ_CPIJ002563 I
CPIJ002563 Culex quinquefasciatus CPIJ002563 I
KGM_12572 Danaus plexippus KGM_12572 I
DAPPUDRAFT_304115 Daphnia pulex DAPPUDRAFT_304115 I
YQE_06624 Dendroctonus ponderosae YQE_06624 I
YQE_08737 Dendroctonus ponderosae YQE_08737 I
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I
GF22974 Drosophila ananassae FBgn0099968 I
GG11819 Drosophila erecta FBgn0104114 I
GH18642 Drosophila grimshawi FBgn0126109 I
Med Drosophila melanogaster FBgn0011655 D
GI23400 Drosophila mojavensis FBgn0146126 I
GL23637 Drosophila persimilis FBgn0161227 I
GA14643 Drosophila pseudoobscura FBgn0074670 I
GM16436 Drosophila sechellia FBgn0171351 I
GJ23092 Drosophila virilis FBgn0210194 I
GK11724 Drosophila willistoni FBgn0213735 I
GE10952 Drosophila yakuba FBgn0228782 I
EEL_0000707501 Elaeophora elaphi EEL_0000707501 I
EVEC_0000355201 Enterobius vermicularis EVEC_0000355201 I
ENSGACG00000003171 Gasterosteus aculeatus ENSGACG00000003171 I
GPUH_0001329001 Gongylonema pulchrum GPUH_0001329001 I
HHAL000393-PA Halyomorpha halys HHAL000393-PA I
HHAL000394-PA Halyomorpha halys HHAL000394-PA I
Hsal_09633--XP_392838.3_APIME Harpegnathos saltator Hsal_09633--XP_392838.3_APIME I
HMEL002203 Heliconius melpomene HMEL002203 I
HPBE_0001599301 Heligmosomoides bakeri HPBE_0001599301 I
HelroG76435 Helobdella robusta HelroG76435 I
ISCW018468 Ixodes scapularis ISCW018468 I
LDEC015949 Leptinotarsa decemlineata LDEC015949 I
nLs.2.1.2.g01457 Litomosoides sigmodontis nLs.2.1.2.g01457 I
LOAG_08923 Loa loa LOAG_08923 I
LCUP007928 Lucilia cuprina LCUP007928 I
LLOJ008806 Lutzomyia longipalpis LLOJ008806 I
MCINX014520 Melitaea cinxia MCINX014520 I
genemark-nMf.1.1.scaf08549-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf08549-processed-gene-0.3 N
maker-nMf.1.1.scaf02670-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf02670-augustus-gene-0.3 I
MhA1_Contig1148.frz3.fgene1 Meloidogyne hapla MhA1_Contig1148.frz3.fgene1 N
Minc05381 Meloidogyne incognita Minc05381 I
Minc06628 Meloidogyne incognita Minc06628 I
Minc15475 Meloidogyne incognita Minc15475 N
ML02191a Mnemiopsis leidyi ML02191a I
MDOA012885 Musca domestica MDOA012885 I
NV12984 Nasonia vitripennis NV12984 I
NECAME_01081 Necator americanus NECAME_01081 N
NEMVEDRAFT_v1g248037 Nematostella vectensis NEMVEDRAFT_v1g248037 I
NBR_0001502601 Nippostrongylus brasiliensis NBR_0001502601 N
OESDEN_03018 Oesophagostomum dentatum OESDEN_03018 I
nOo.2.0.1.g00181 Onchocerca ochengi nOo.2.0.1.g00181 I
WBGene00241622 Onchocerca volvulus WBGene00241622 I
SMAD4 Oryzias latipes ENSORLG00000007703 I
PHUM002670 Pediculus humanus PHUM002670 I
ENSPMAG00000008404 Petromyzon marinus ENSPMAG00000008404 I
PPAI002168 Phlebotomus papatasi PPAI002168 I
ENSPFOG00000019807 Poecilia formosa ENSPFOG00000019807 I
RPRC010188 Rhodnius prolixus RPRC010188 I
SINV15516 Solenopsis invicta SINV15516 I
L596_g15 Steinernema carpocapsae L596_g15 I
L889_g28104 Steinernema feltiae L889_g28104 I
L893_g344 Steinernema glaseri L893_g344 I
L898_g17086 Steinernema monticolum L898_g17086 I
L892_g27454 Steinernema scapterisci L892_g27454 I
SMAR013850 Strigamia maritima SMAR013850 I
SPU_004287 Strongylocentrotus purpuratus SPU_004287 I
SVUK_0000938201 Strongylus vulgaris SVUK_0000938201 I
SMAD4 Takifugu rubripes ENSTRUG00000014045 I
TELCIR_19676 Teladorsagia circumcincta TELCIR_19676 I
SMAD4 Tetraodon nigroviridis ENSTNIG00000009050 I
TCLT_0000917301 Thelazia callipaeda TCLT_0000917301 I
TC010848 Tribolium castaneum TC010848 I
D917_09719 Trichinella nativa D917_09719 I
EFV62078 Trichinella spiralis EFV62078 I
TMUE_s0006012700 Trichuris muris TMUE_s0006012700 I
D918_00298 Trichuris suis D918_00298 I
TTRE_0000855901 Trichuris trichiura TTRE_0000855901 I
WUBG_02880 Wuchereria bancrofti WUBG_02880 I
ENSXMAG00000005051 Xiphophorus maculatus ENSXMAG00000005051 I
L798_13939 Zootermopsis nevadensis L798_13939 I