Smp_029620 (Schistosoma mansoni)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Smp_029620 T223459_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ind
M06527_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0228.1 		0.726 0.667
ind
M06329_2.00 		Drosophila melanogaster
YVYTAATKA
TMATTARBR		 B1H
Zhu et al.(2011)
Ind_Cell_FBgn0025776 		0.726 0.667
Gsx2
M00469_2.00 		Mus musculus
NTAATDDNN
NNHHATTAN		 PBM
Berger et al.(2008)
Gsh2_3990 		0.723 0.667
GSX2
M03227_2.00 		Homo sapiens
NNTAATKRNN
NNYMATTANN		 SELEX
Jolma et al.(2013)
GSX2_1 		0.723 0.667
GSX2
M05329_2.00 		Homo sapiens
HTAATKRS
SYMATTAD		 SELEX
Yin et al.(2017)
GSX2_eDBD_HT-SELEX 		0.723 0.667
GSX2
M05330_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
GSX2_eDBD_Methyl-HT-SELEX 		0.723 0.667
GSX1
M03205_2.00 		Homo sapiens
NNTAATKRNN
NNYMATTANN		 SELEX
Jolma et al.(2013)
GSX1_1 		0.722 0.649
GSX1
M05271_2.00 		Homo sapiens
NYMATNRN
NYNATKRN		 SELEX
Yin et al.(2017)
GSX1_eDBD_HT-SELEX 		0.722 0.649
GSX1
M05272_2.00 		Homo sapiens
NTAAYGAB
VTCRTTAN		 SELEX
Yin et al.(2017)
GSX1_eDBD_Methyl-HT-SELEX 		0.722 0.649
SPU_026099
M02175_2.00 		Strongylocentrotus purpuratus
KTAATTRB
VYAATTAM		 PBM
Weirauch et al.(2014)
pTH6140 		0.667 0.579
Pdx1
M00446_2.00 		Mus musculus
NWRAYNNN
NNNRTYWN		 PBM
Berger et al.(2008)
Ipf1_3815 		0.667 0.561
PDX1
M03155_2.00 		Homo sapiens
NTAATTRNNNYTAATTRN
NYAATTARNNNYAATTAN		 SELEX
Jolma et al.(2013)
PDX1_1 		0.667 0.561
PDX1
M03156_2.00 		Homo sapiens
BTAATKRN
NYMATTAV		 SELEX
Jolma et al.(2013)
PDX1_2 		0.667 0.561
PDX1
M05161_2.00 		Homo sapiens
YTAATKRB
VYMATTAR		 SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX 		0.667 0.561
PDX1
M09147_2.00 		Homo sapiens
TGATWGATK
MATCWATCA		 Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A 		0.667 0.561
Pdx1
M09192_2.00 		Mus musculus
VYTAATGRB
VYCATTARB		 Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B 		0.667 0.561
Pdx1
M09571_2.00 		Mus musculus
TGATTRATKR
YMATYAATCA		 Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281 		0.667 0.561
PDX1
M10699_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_01 		0.667 0.561
PDX1
M10700_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_02 		0.667 0.561
PDX1
M10701_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_03 		0.667 0.561
PDX1
M10702_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_04 		0.667 0.561
PDX1
M10703_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_05 		0.667 0.561
PDX1
M10704_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q4_01 		0.667 0.561
PDX1
M10705_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q4 		0.667 0.561
PDX1
M10706_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q5_01 		0.667 0.561
PDX1
M10707_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q5 		0.667 0.561
PDX1
M10708_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q6 		0.667 0.561
PDX1
M05162_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1 		0.667 0.561
PDX1
M05163_2.00 		Homo sapiens
YTAATKRB
VYMATTAR		 SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2 		0.667 0.561
Noto
M02101_2.00 		Mus musculus
NNHHATDDNN
NNHHATDDNN		 PBM
Weirauch et al.(2014)
pTH6268 		0.663 0.491
Nkx1-1
M00442_2.00 		Mus musculus
NNTAATNDNN
NNHNATTANN		 PBM
Berger et al.(2008)
Nkx1-1_3856 		0.655 0.579
Nkx1-2
M00503_2.00 		Mus musculus
NNTAAWNDN
NHNWTTANN		 PBM
Berger et al.(2008)
Nkx1-2_3214 		0.655 0.579
slou
M00557_2.00 		Drosophila melanogaster
NNTAATDRN
NYHATTANN		 PBM
Busser et al.(2012a)
Slou 		0.655 0.579
slou
M03798_2.00 		Drosophila melanogaster
VBTAATTRSB
VSYAATTAVB		 SELEX
Nitta et al.(2015)
slou_1 		0.655 0.579
slou
M06494_2.00 		Drosophila melanogaster
YTAATKR
YMATTAR		 B1H
Mathelier et al.(2014)
MA0245.1 		0.655 0.579
slou
M06262_2.00 		Drosophila melanogaster
BYTAATKR
YMATTARV		 B1H
Zhu et al.(2011)
Slou_Cell_FBgn0002941 		0.655 0.579
slou
M06263_2.00 		Drosophila melanogaster
HTAATKR
YMATTAD		 B1H
Zhu et al.(2011)
Slou_SOLEXA_FBgn0002941 		0.655 0.579
NEMVEDRAFT_v1g8907
M02154_2.00 		Nematostella vectensis
NTAATDRNNN
NNNYHATTAN		 PBM
Weirauch et al.(2014)
pTH6483 		0.649 0.596
Q0N4M8_NEMVE
M02166_2.00 		Nematostella vectensis
HTAATKAC
GTMATTAD		 PBM
Weirauch et al.(2014)
pTH6215 		0.646 0.544
Hoxd3
M00531_2.00 		Mus musculus
NTAATNDN
NHNATTAN		 PBM
Berger et al.(2008)
Hoxd3_1742 		0.646 0.544
Hoxa3
M00172_2.00 		Mus musculus
NTAATKRNNN
NNNYMATTAN		 PBM
Badis et al.(2009)
Hoxa3_2783 		0.646 0.544
Hoxa3
M00532_2.00 		Mus musculus
NTAATKRNN
NNYMATTAN		 PBM
Berger et al.(2008)
Hoxa3_2783 		0.646 0.544
Hoxd3
M03287_2.00 		Mus musculus
NNTAATKRNN
NNYMATTANN		 SELEX
Jolma et al.(2013)
Hoxd3_1 		0.646 0.544
HOXD3
M05101_2.00 		Homo sapiens
CTAATTAS
STAATTAG		 SELEX
Yin et al.(2017)
HOXD3_FL_HT-SELEX 		0.646 0.544
HOXA3
M10651_2.00 		Homo sapiens
SVTWNDDKB
VMHHNWABS		 Transfac
Matys et al.(2006)
V$HOXA3_01 		0.646 0.544
HOXD3
M05102_2.00 		Homo sapiens
YTAAYGAY
RTCRTTAR		 SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_1 		0.646 0.544
HOXD3
M05103_2.00 		Homo sapiens
CTAATKAC
GTMATTAG		 SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_2 		0.646 0.544
Hoxb3
M00504_2.00 		Mus musculus
NTAATKRNN
NNYMATTAN		 PBM
Berger et al.(2008)
Hoxb3_1720 		0.646 0.526
HOXB3
M03126_2.00 		Homo sapiens
NBTAATKRNN
NNYMATTAVN		 SELEX
Jolma et al.(2013)
HOXB3_1 		0.646 0.526
ESX1
M00291_2.00 		Homo sapiens
NNTRATNRN
NYNATYANN		 PBM
Barrera et al.(2016)
ESX1_K193R 		0.645 0.526
NOTO
M03241_2.00 		Homo sapiens
NNTAATKWRN
NYWMATTANN		 SELEX
Jolma et al.(2013)
NOTO_1 		0.645 0.474
NOTO
M05390_2.00 		Homo sapiens
BTAATKRV
BYMATTAV		 SELEX
Yin et al.(2017)
NOTO_eDBD_HT-SELEX 		0.645 0.474
NOTO
M05391_2.00 		Homo sapiens
BTMATKRV
BYMATKAV		 SELEX
Yin et al.(2017)
NOTO_eDBD_Methyl-HT-SELEX 		0.645 0.474
zen
M03805_2.00 		Drosophila melanogaster
BTAATKRB
VYMATTAV		 SELEX
Nitta et al.(2015)
zen_1 		0.644 0.579
zen
M06500_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0256.1 		0.644 0.579
zen
M06276_2.00 		Drosophila melanogaster
NBYTAATKA
TMATTARBN		 B1H
Zhu et al.(2011)
Zen_Cell_FBgn0004053 		0.644 0.579
zen
M06277_2.00 		Drosophila melanogaster
AANWTWAWTG
CAWTWAWNTT		 B1H
Zhu et al.(2011)
zen_FlyReg_FBgn0004053 		0.644 0.579
zen
M06278_2.00 		Drosophila melanogaster
NYTAATKA
TMATTARN		 B1H
Zhu et al.(2011)
Zen_SOLEXA_FBgn0004053 		0.644 0.579
zen2
M02118_2.00 		Drosophila melanogaster
NNTAATKRNN
NNYMATTANN		 PBM
Weirauch et al.(2014)
pTH5479 		0.644 0.596
zen2
M03806_2.00 		Drosophila melanogaster
BTAATKAS
STMATTAV		 SELEX
Nitta et al.(2015)
zen2_1 		0.644 0.596
zen2
M03807_2.00 		Drosophila melanogaster
BTAATKWNNVRNNNNYBNNWMATTAV
BTAATKWNNVRNNNNYBNNWMATTAV		 SELEX
Nitta et al.(2015)
zen2_2 		0.644 0.596
zen2
M06501_2.00 		Drosophila melanogaster
BTAATKA
TMATTAV		 B1H
Mathelier et al.(2014)
MA0257.1 		0.644 0.596
zen2
M06279_2.00 		Drosophila melanogaster
HNBTAATKA
TMATTAVND		 B1H
Zhu et al.(2011)
Zen2_Cell_FBgn0004054 		0.644 0.596
zen2
M06280_2.00 		Drosophila melanogaster
NNNTAATKRN
NYMATTANNN		 B1H
Zhu et al.(2011)
zen2_SOLEXA_2_FBgn0004054 		0.644 0.596
zen2
M06281_2.00 		Drosophila melanogaster
YTAATKR
YMATTAR		 B1H
Zhu et al.(2011)
Zen2_SOLEXA_FBgn0004054 		0.644 0.596
Mnx1
M00388_2.00 		Mus musculus
NTAATBDNNN
NNNHVATTAN		 PBM
Berger et al.(2008)
Hlxb9_3422 		0.638 0.561
MNX1
M03143_2.00 		Homo sapiens
NHTAATTRNH
DNYAATTADN		 SELEX
Jolma et al.(2013)
MNX1_1 		0.638 0.561
MNX1
M05126_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MNX1_eDBD_HT-SELEX 		0.638 0.561
MNX1
M05127_2.00 		Homo sapiens
HTAAYGHB
VDCRTTAD		 SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_1 		0.638 0.561
MNX1
M05128_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_2 		0.638 0.561
exex
M03871_2.00 		Drosophila melanogaster
NNNNYAATTNNYDN
NHRNNAATTRNNNN		 SELEX
Nitta et al.(2015)
exex_1 		0.638 0.544
exex
M06544_2.00 		Drosophila melanogaster
BTAATTA
TAATTAV		 B1H
Mathelier et al.(2014)
MA0224.1 		0.638 0.544
exex
M06364_2.00 		Drosophila melanogaster
TAATTAV
BTAATTA		 B1H
Zhu et al.(2011)
Exex_Cell_FBgn0041156 		0.638 0.544
exex
M06365_2.00 		Drosophila melanogaster
TAATBR
YVATTA		 B1H
Zhu et al.(2011)
Exex_SOLEXA_FBgn0041156 		0.638 0.544
CG18599
M06539_2.00 		Drosophila melanogaster
HTAATKA
TMATTAD		 B1H
Mathelier et al.(2014)
MA0177.1 		0.629 0.579
CG18599
M06354_2.00 		Drosophila melanogaster
HTAATKA
TMATTAD		 B1H
Zhu et al.(2011)
CG18599_Cell_FBgn0038592 		0.629 0.579
CG18599
M06355_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Zhu et al.(2011)
CG18599_SOLEXA_FBgn0038592 		0.629 0.579
En2
M00484_2.00 		Mus musculus
NNYHATHN
NDATDRNN		 PBM
Berger et al.(2008)
En2_0952 		0.629 0.509
EN2
M03189_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
EN2_1 		0.629 0.509
EN2
M03190_2.00 		Homo sapiens
VBTAATTRNN
NNYAATTAVB		 SELEX
Jolma et al.(2013)
EN2_2 		0.629 0.509
En2
M03276_2.00 		Mus musculus
VBTAATTASN
NSTAATTAVB		 SELEX
Jolma et al.(2013)
En2_1 		0.629 0.509
EN2
M05237_2.00 		Homo sapiens
BTAATTRV
BYAATTAV		 SELEX
Yin et al.(2017)
EN2_eDBD_HT-SELEX 		0.629 0.509
EN2
M05238_2.00 		Homo sapiens
VHTDAYGHB
VDCRTHADB		 SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_1 		0.629 0.509
EN2
M05239_2.00 		Homo sapiens
BTAATTRV
BYAATTAV		 SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_2 		0.629 0.509
En1
M00519_2.00 		Mus musculus
HNWTNNN
NNNAWND		 PBM
Berger et al.(2008)
En1_3123 		0.629 0.491
EN1
M03180_2.00 		Homo sapiens
NNTAATTRVB
VBYAATTANN		 SELEX
Jolma et al.(2013)
EN1_1 		0.629 0.491
EN1
M03181_2.00 		Homo sapiens
TAATTRSNYAATTA
TAATTRNSYAATTA		 SELEX
Jolma et al.(2013)
EN1_2 		0.629 0.491
EN1
M03182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Jolma et al.(2013)
EN1_3 		0.629 0.491
EN1
M03183_2.00 		Homo sapiens
TDAKKRSNYMATTA
TAATKRNSYMMTHA		 SELEX
Jolma et al.(2013)
EN1_4 		0.629 0.491
EN1
M05218_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
EN1_eDBD_HT-SELEX 		0.629 0.491
EN1
M05871_2.00 		Homo sapiens
VNYAATTA
TAATTRNB		 SMiLE-seq
Isakova et al.(2017)
EN1 		0.629 0.491
EN1
M10714_2.00 		Homo sapiens
RTDDTBB
VVAHHAY		 Transfac
Matys et al.(2006)
V$EN1_01 		0.629 0.491
EN1
M05219_2.00 		Homo sapiens
NTAAYGAB
VTCRTTAN		 SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_1 		0.629 0.491
EN1
M05220_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_2 		0.629 0.491
unpg
M03836_2.00 		Drosophila melanogaster
SSTAATYRVN
NBYRATTASS		 SELEX
Nitta et al.(2015)
unpg_1 		0.629 0.561
unpg
M06517_2.00 		Drosophila melanogaster
BTAATTR
YAATTAV		 B1H
Mathelier et al.(2014)
MA0251.1 		0.629 0.561
unpg
M06311_2.00 		Drosophila melanogaster
NBTAATTR
YAATTAVN		 B1H
Zhu et al.(2011)
Unpg_Cell_FBgn0015561 		0.629 0.561
unpg
M06312_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
Unpg_SOLEXA_FBgn0015561 		0.629 0.561
Gbx2
M00462_2.00 		Mus musculus
NNDAHNN
NNDTHNN		 PBM
Berger et al.(2008)
Gbx2_3110 		0.629 0.544
Gbx1
M00525_2.00 		Mus musculus
NNTAATNR
YNATTANN		 PBM
Berger et al.(2008)
Gbx1_2883 		0.629 0.544
GBX1
M03193_2.00 		Homo sapiens
NBTAATTRSB
VSYAATTAVN		 SELEX
Jolma et al.(2013)
GBX1_1 		0.629 0.544
GBX2
M03201_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
GBX2_1 		0.629 0.544
GBX2
M03202_2.00 		Homo sapiens
TAATTRVBCAATWA
TWATTGVBYAATTA		 SELEX
Jolma et al.(2013)
GBX2_2 		0.629 0.544
GBX2
M03203_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
GBX2_3 		0.629 0.544
Gbx1
M03286_2.00 		Mus musculus
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
Gbx1_1 		0.629 0.544
Gbx2
M03268_2.00 		Mus musculus
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
Gbx2_1 		0.629 0.544
GBX2
M05265_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
GBX2_eDBD_HT-SELEX 		0.629 0.544
GBX2
M05268_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
GBX2_FL_HT-SELEX 		0.629 0.544
GBX2
M05266_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
GBX2_eDBD_Methyl-HT-SELEX_1 		0.629 0.544
GBX2
M05267_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
GBX2_eDBD_Methyl-HT-SELEX_2 		0.629 0.544
GBX2
M05269_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
GBX2_FL_Methyl-HT-SELEX_1 		0.629 0.544
GBX2
M05270_2.00 		Homo sapiens
NTAAYGAB
VTCRTTAN		 SELEX
Yin et al.(2017)
GBX2_FL_Methyl-HT-SELEX_2 		0.629 0.544
en
M03793_2.00 		Drosophila melanogaster
NTAATTRN
NYAATTAN		 SELEX
Nitta et al.(2015)
en_1 		0.627 0.474
en
M06485_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Mathelier et al.(2014)
MA0220.1 		0.627 0.474
en
M06236_2.00 		Drosophila melanogaster
NYTAATTR
YAATTARN		 B1H
Zhu et al.(2011)
En_Cell_FBgn0000577 		0.627 0.474
en
M06237_2.00 		Drosophila melanogaster
DBTAATKR
YMATTAVH		 B1H
Zhu et al.(2011)
en_FlyReg_FBgn0000577 		0.627 0.474
en
M06238_2.00 		Drosophila melanogaster
NNNTAATTRN
NYAATTANNN		 B1H
Zhu et al.(2011)
en_SOLEXA_2_FBgn0000577 		0.627 0.474
en
M06239_2.00 		Drosophila melanogaster
NTAATTR
YAATTAN		 B1H
Zhu et al.(2011)
En_SOLEXA_FBgn0000577 		0.627 0.474
en
M09677_2.00 		Drosophila melanogaster
HTAATTRN
NYAATTAD		 Misc
Kulakovskiy et al.(2009)
en 		0.627 0.474
en
M10785_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$EN_Q6 		0.627 0.474
inv
M06491_2.00 		Drosophila melanogaster
DYTAATTR
YAATTARH		 B1H
Mathelier et al.(2014)
MA0229.1 		0.627 0.456
inv
M06255_2.00 		Drosophila melanogaster
DYTAATTR
YAATTARH		 B1H
Zhu et al.(2011)
Inv_Cell_FBgn0001269 		0.627 0.456
inv
M06256_2.00 		Drosophila melanogaster
NHTAATTRV
BYAATTADN		 B1H
Zhu et al.(2011)
inv_SOLEXA_2_FBgn0001269 		0.627 0.456
inv
M06257_2.00 		Drosophila melanogaster
NHTAATTRV
BYAATTADN		 B1H
Zhu et al.(2011)
inv_SOLEXA_5_FBgn0001269 		0.627 0.456
Q4RRY4_TETNG
M02169_2.00 		Tetraodon nigroviridis
NNYAATYAN
NTRATTRNN		 PBM
Weirauch et al.(2014)
pTH6326 		0.623 0.421
prd-b
M02077_2.00 		Ciona intestinalis
NTRATTRNN
NNYAATYAN		 PBM
Weirauch et al.(2014)
pTH6284 		0.623 0.421
ems
M02114_2.00 		Drosophila melanogaster
NTAATKRNB
VNYMATTAN		 PBM
Weirauch et al.(2014)
pTH5673 		0.618 0.526
ems
M03789_2.00 		Drosophila melanogaster
BTAATTAN
NTAATTAV		 SELEX
Nitta et al.(2015)
ems_1 		0.618 0.526
ems
M03790_2.00 		Drosophila melanogaster
BTAATTAVBVBTAATKRN
NYMATTAVBVBTAATTAV		 SELEX
Nitta et al.(2015)
ems_2 		0.618 0.526
ems
M03791_2.00 		Drosophila melanogaster
BTAATKRN
NYMATTAV		 SELEX
Nitta et al.(2015)
ems_3 		0.618 0.526
ems
M03792_2.00 		Drosophila melanogaster
STAATKRSSSSTAATKRV
BYMATTASSSSYMATTAS		 SELEX
Nitta et al.(2015)
ems_4 		0.618 0.526
ems
M06484_2.00 		Drosophila melanogaster
HTAATKR
YMATTAD		 B1H
Mathelier et al.(2014)
MA0219.1 		0.618 0.526
ems
M06233_2.00 		Drosophila melanogaster
WHTAATKR
YMATTADW		 B1H
Zhu et al.(2011)
Ems_Cell_FBgn0000576 		0.618 0.526
ems
M06234_2.00 		Drosophila melanogaster
TSTMATHM
KDATKASA		 B1H
Zhu et al.(2011)
ems_FlyReg_FBgn0000576 		0.618 0.526
ems
M06235_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Zhu et al.(2011)
Ems_SOLEXA_FBgn0000576 		0.618 0.526
ems
M09676_2.00 		Drosophila melanogaster
WTWATGA
TCATWAW		 Misc
Kulakovskiy et al.(2009)
ems 		0.618 0.526
Hoxa4
M00383_2.00 		Mus musculus
NTAATBDNN
NNHVATTAN		 PBM
Berger et al.(2008)
Hoxa4_3426 		0.615 0.544
Hoxa5
M00478_2.00 		Mus musculus
NTAATNDNN
NNHNATTAN		 PBM
Berger et al.(2008)
Hoxa5_3415 		0.615 0.544
Hoxb5
M00480_2.00 		Mus musculus
NWDWTNNNN
NNNNAWHWN		 PBM
Berger et al.(2008)
Hoxb5_3122 		0.615 0.544
HOXB5
M03125_2.00 		Homo sapiens
NNKAATKRNN
NNYMATTMNN		 SELEX
Jolma et al.(2013)
HOXB5_1 		0.615 0.544
HOXA4
M05381_2.00 		Homo sapiens
NTAATKRY
RYMATTAN		 SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX 		0.615 0.544
HOXA5
M04968_2.00 		Homo sapiens
STAATKRS
SYMATTAS		 SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX 		0.615 0.544
HOXA5
M04971_2.00 		Homo sapiens
NTMATKRB
VYMATKAN		 SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX 		0.615 0.544
HOXB5
M05051_2.00 		Homo sapiens
NTAATKRV
BYMATTAN		 SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX 		0.615 0.544
HOXB5
M05054_2.00 		Homo sapiens
STMATKAB
VTMATKAS		 SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX 		0.615 0.544
HOXA5
M10652_2.00 		Homo sapiens
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR
YSCHHHBHYCYYMATTABTVNDHVMVHYCN		 Transfac
Matys et al.(2006)
V$HOX13_01 		0.615 0.544
HOXA4
M10755_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA4_Q2 		0.615 0.544
HOXA5
M08457_2.00 		Homo sapiens
CDBWAATK
MATTWVHG		 COMPILED
Mathelier et al.(2014)
MA0158.1 		0.615 0.544
HOXA4
M05382_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX 		0.615 0.544
HOXA5
M04969_2.00 		Homo sapiens
BTAATKRV
BYMATTAV		 SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1 		0.615 0.544
HOXA5
M04970_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2 		0.615 0.544
HOXA5
M04972_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1 		0.615 0.544
HOXA5
M04973_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2 		0.615 0.544
HOXB5
M05052_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1 		0.615 0.544
HOXB5
M05053_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2 		0.615 0.544
HOXB5
M05055_2.00 		Homo sapiens
NTMATKAB
VTMATKAN		 SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1 		0.615 0.544
HOXB5
M05056_2.00 		Homo sapiens
HTAAYGAY
RTCRTTAD		 SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2 		0.615 0.544
HOXC4
M00330_2.00 		Homo sapiens
YTAATTRB
VYAATTAR		 PBM
Barrera et al.(2016)
HOXC4_REF 		0.615 0.526
Hoxc4
M00530_2.00 		Mus musculus
NWAATNDNN
NNHNATTWN		 PBM
Berger et al.(2008)
Hoxc4_3491 		0.615 0.526
Dfd
M03784_2.00 		Drosophila melanogaster
VNTAAYKRBN
NVYMRTTANB		 SELEX
Nitta et al.(2015)
Dfd_1 		0.615 0.526
Dfd
M03785_2.00 		Drosophila melanogaster
VYTAATKAYN
NRTMATTARB		 SELEX
Nitta et al.(2015)
Dfd_2 		0.615 0.526
HOXC4
M05385_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX 		0.615 0.526
HOXD4
M05273_2.00 		Homo sapiens
NTMATKRV
BYMATKAN		 SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX 		0.615 0.526
HOXD4
M05276_2.00 		Homo sapiens
NTAATKRB
VYMATTAN		 SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX 		0.615 0.526
Dfd
M06481_2.00 		Drosophila melanogaster
YTAATGA
TCATTAR		 B1H
Mathelier et al.(2014)
MA0186.1 		0.615 0.526
Dfd
M06226_2.00 		Drosophila melanogaster
VYTAATGA
TCATTAAB		 B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439 		0.615 0.526
Dfd
M06227_2.00 		Drosophila melanogaster
TTAATKRY
RYMATTAA		 B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439 		0.615 0.526
Dfd
M06228_2.00 		Drosophila melanogaster
NBTAATKR
YMATTAVN		 B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439 		0.615 0.526
Dfd
M09675_2.00 		Drosophila melanogaster
TTAATKRB
VYMATTAA		 Misc
Kulakovskiy et al.(2009)
Dfd 		0.615 0.526
Dfd
M10784_2.00 		Drosophila melanogaster
NNNNRKTAATNNNNNN
NNNNNNATTAMYNNNN		 Transfac
Matys et al.(2006)
I$DFD_01 		0.615 0.526
HOXC4
M00328_2.00 		Homo sapiens
YTAATTAB
VTAATTAR		 PBM
Barrera et al.(2016)
HOXC4_N178S 		0.615 0.526
HOXC4
M05386_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1 		0.615 0.526
HOXC4
M05387_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2 		0.615 0.526
HOXD4
M05274_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1 		0.615 0.526
HOXD4
M05275_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2 		0.615 0.526
HOXD4
M05277_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1 		0.615 0.526
HOXD4
M05278_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2 		0.615 0.526
Hoxb4
M00479_2.00 		Mus musculus
NTAATNDNN
NNHNATTAN		 PBM
Berger et al.(2008)
Hoxb4_2627 		0.615 0.509
HOXB4
M05343_2.00 		Homo sapiens
YTAATKAY
RTMATTAR		 SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX 		0.615 0.509
HOXB4
M09162_2.00 		Homo sapiens
YTAATKRS
SYMATTAR		 Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B 		0.615 0.509
Hoxb4
M09204_2.00 		Mus musculus
YTAATKRS
SYMATTAR		 Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A 		0.615 0.509
Hoxb4
M09576_2.00 		Mus musculus
TGATDRATKRSN
NSYMATYHATCA		 Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014 		0.615 0.509
HOXB4
M05344_2.00 		Homo sapiens
HTAAYGAY
RTCRTTAD		 SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1 		0.615 0.509
HOXB4
M05345_2.00 		Homo sapiens
HTAAYKAB
VTMRTTAD		 SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2 		0.615 0.509
A1JVI6_MOUSE
M02033_2.00 		Mus musculus
HTGATTGN
NCAATCAD		 PBM
Weirauch et al.(2014)
pTH5986 		0.615 0.386
VAX2
M00284_2.00 		Homo sapiens
NNTAATND
HNATTANN		 PBM
Barrera et al.(2016)
VAX2_REF 		0.615 0.526
Vax1
M00398_2.00 		Mus musculus
NTAATNDNN
NNHNATTAN		 PBM
Berger et al.(2008)
Vax1_3499 		0.615 0.526
Vax2
M00464_2.00 		Mus musculus
NTAATDDNN
NNHHATTAN		 PBM
Berger et al.(2008)
Vax2_3500 		0.615 0.526
VAX2
M03119_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX2_1 		0.615 0.526
VAX2
M05030_2.00 		Homo sapiens
BTAATTRV
BYAATTAV		 SELEX
Yin et al.(2017)
VAX2_FL_HT-SELEX 		0.615 0.526
Vax1
M10764_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$VAX1_04 		0.615 0.526
VAX2
M05031_2.00 		Homo sapiens
BTAATTRV
BYAATTAV		 SELEX
Yin et al.(2017)
VAX2_FL_Methyl-HT-SELEX 		0.615 0.526
Hoxc5
M00422_2.00 		Mus musculus
NWRATND
HNATYWN		 PBM
Berger et al.(2008)
Hoxc5_2630 		0.614 0.544
eve
M00556_2.00 		Drosophila melanogaster
NNTAATTARN
NYTAATTANN		 PBM
Busser et al.(2012a)
Eve 		0.611 0.509
eve
M02115_2.00 		Drosophila melanogaster
NTAATNDNN
NNHNATTAN		 PBM
Weirauch et al.(2014)
pTH6436 		0.611 0.509
eve
M03794_2.00 		Drosophila melanogaster
VYTAATKASN
NSTMATTARB		 SELEX
Nitta et al.(2015)
eve_1 		0.611 0.509
eve
M06486_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0221.1 		0.611 0.509
eve
M06240_2.00 		Drosophila melanogaster
DYTAATKA
TMATTARH		 B1H
Zhu et al.(2011)
Eve_Cell_FBgn0000606 		0.611 0.509
eve
M06241_2.00 		Drosophila melanogaster
HKBTAAYNDTKY
RMAHNRTTAVMD		 B1H
Zhu et al.(2011)
eve_FlyReg_FBgn0000606 		0.611 0.509
eve
M06242_2.00 		Drosophila melanogaster
NYTAATKA
TMATTARN		 B1H
Zhu et al.(2011)
Eve_SOLEXA_FBgn0000606 		0.611 0.509
eve
M09678_2.00 		Drosophila melanogaster
NKHTAATKD
HMATTADMN		 Misc
Kulakovskiy et al.(2009)
eve 		0.611 0.509
eve
M10786_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$EVE_Q6 		0.611 0.509
VAX2
M00283_2.00 		Homo sapiens
NNTAAWNDNN
NNHNWTTANN		 PBM
Barrera et al.(2016)
VAX2_L139M 		0.609 0.509
pb
M03872_2.00 		Drosophila melanogaster
NTRAYKRY
RYMRTYAN		 SELEX
Nitta et al.(2015)
pb_1 		0.604 0.526
pb
M06545_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0238.1 		0.604 0.526
pb
M06366_2.00 		Drosophila melanogaster
BYTAATKA
TMATTARV		 B1H
Zhu et al.(2011)
Pb_Cell_FBgn0051481 		0.604 0.526
pb
M06367_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Zhu et al.(2011)
Pb_SOLEXA_FBgn0051481 		0.604 0.526
HOXA2
M02083_2.00 		Homo sapiens
NNNDHHNNN
NNNDDHNNN		 PBM
Weirauch et al.(2014)
pTH5887 		0.604 0.509
Hoxa2
M00403_2.00 		Mus musculus
NTAATKRNN
NNYMATTAN		 PBM
Berger et al.(2008)
Hoxa2_3079 		0.604 0.509
HOXA2
M03097_2.00 		Homo sapiens
NBTAATKRNN
NNYMATTAVN		 SELEX
Jolma et al.(2013)
HOXA2_1 		0.604 0.509
HOXB2
M03213_2.00 		Homo sapiens
NNTAATKRNN
NNYMATTANN		 SELEX
Jolma et al.(2013)
HOXB2_1 		0.604 0.509
Hoxa2
M03251_2.00 		Mus musculus
NNTAATKRNN
NNYMATTANN		 SELEX
Jolma et al.(2013)
Hoxa2_1 		0.604 0.509
HOXA2
M04962_2.00 		Homo sapiens
NTAATKRV
BYMATTAN		 SELEX
Yin et al.(2017)
HOXA2_eDBD_HT-SELEX 		0.604 0.509
HOXA2
M04965_2.00 		Homo sapiens
NTAATKAB
VTMATTAN		 SELEX
Yin et al.(2017)
HOXA2_FL_HT-SELEX 		0.604 0.509
HOXB2
M05292_2.00 		Homo sapiens
BTAATKRV
BYMATTAV		 SELEX
Yin et al.(2017)
HOXB2_eDBD_HT-SELEX 		0.604 0.509
Hoxa2
M09566_2.00 		Mus musculus
DTGATKGATKDB
VHMATCMATCAH		 Misc
Heinz et al.(2010)
mES-Hoxa2_Donaldson_et_al. 		0.604 0.509
HOXA2
M04963_2.00 		Homo sapiens
NTAATTAN
NTAATTAN		 SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_1 		0.604 0.509
HOXA2
M04964_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_2 		0.604 0.509
HOXA2
M04966_2.00 		Homo sapiens
NTAATKAB
VTMATTAN		 SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_1 		0.604 0.509
HOXA2
M04967_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_2 		0.604 0.509
HOXB2
M05293_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_1 		0.604 0.509
HOXB2
M05294_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_2 		0.604 0.509
Meox1
M00384_2.00 		Mus musculus
NTRATKRNN
NNYMATYAN		 PBM
Berger et al.(2008)
Meox1_2310 		0.604 0.544
MEOX1
M03077_2.00 		Homo sapiens
NNTAATTASN
NSTAATTANN		 SELEX
Jolma et al.(2013)
MEOX1_1 		0.604 0.544
MEOX1
M04901_2.00 		Homo sapiens
NTDAYGHB
VDCRTHAN		 SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_1 		0.604 0.544
MEOX1
M04902_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_2 		0.604 0.544
MEOX1
M04903_2.00 		Homo sapiens
NTAAYGWB
VWCRTTAN		 SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_1 		0.604 0.544
MEOX1
M04904_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_2 		0.604 0.544
Scr
M03799_2.00 		Drosophila melanogaster
BTAATKRB
VYMATTAV		 SELEX
Nitta et al.(2015)
Scr_1 		0.602 0.544
Scr
M06496_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0203.1 		0.602 0.544
Scr
M06266_2.00 		Drosophila melanogaster
HVYTAATKA
TMATTARBD		 B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339 		0.602 0.544
Scr
M06267_2.00 		Drosophila melanogaster
YTAATKR
YMATTAR		 B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339 		0.602 0.544
NEMVEDRAFT_v1g205636
M02150_2.00 		Nematostella vectensis
NTAATTAN
NTAATTAN		 PBM
Weirauch et al.(2014)
pTH5491 		0.602 0.491
lin-39
M08211_2.00 		Caenorhabditis elegans
GATTGATG
CATCAATC		 ChIP-seq
Contrino et al.(2012)
Mw154 		0.599 0.544
lin-39
M09582_2.00 		Caenorhabditis elegans
DTGATWRATK
MATYWATCAH		 Misc
Heinz et al.(2010)
cElegans.L3-LIN39_modEncode 		0.599 0.544
E5
M03814_2.00 		Drosophila melanogaster
STAATKNN
NNMATTAS		 SELEX
Nitta et al.(2015)
E5_1 		0.599 0.491
E5
M06507_2.00 		Drosophila melanogaster
BTAATKA
TMATTAV		 B1H
Mathelier et al.(2014)
MA0189.1 		0.599 0.491
E5
M06293_2.00 		Drosophila melanogaster
NBTAATKA
TMATTAVN		 B1H
Zhu et al.(2011)
E5_Cell_FBgn0008646 		0.599 0.491
E5
M06294_2.00 		Drosophila melanogaster
NTAATDR
YHATTAN		 B1H
Zhu et al.(2011)
E5_SOLEXA_FBgn0008646 		0.599 0.491
EMX1
M02088_2.00 		Homo sapiens
NNTAATKANN
NNTMATTANN		 PBM
Weirauch et al.(2014)
pTH5677 		0.599 0.474
Emx2
M00495_2.00 		Mus musculus
NTAATDDNN
NNHHATTAN		 PBM
Berger et al.(2008)
Emx2_3420 		0.599 0.474
EMX1
M03151_2.00 		Homo sapiens
NBTAATTRNN
NNYAATTAVN		 SELEX
Jolma et al.(2013)
EMX1_1 		0.599 0.474
EMX1
M03152_2.00 		Homo sapiens
YMATTARYTAATKR
YMATTARYTAATKR		 SELEX
Jolma et al.(2013)
EMX1_2 		0.599 0.474
EMX2
M03210_2.00 		Homo sapiens
NBTAATTANN
NNTAATTAVN		 SELEX
Jolma et al.(2013)
EMX2_1 		0.599 0.474
EMX2
M03211_2.00 		Homo sapiens
YMATTARBTAATKR
YMATTAVYTAATKR		 SELEX
Jolma et al.(2013)
EMX2_2 		0.599 0.474
EMX1
M05145_2.00 		Homo sapiens
BTAATTAN
NTAATTAV		 SELEX
Yin et al.(2017)
EMX1_eDBD_HT-SELEX 		0.599 0.474
EMX1
M05147_2.00 		Homo sapiens
BTAATTAV
BTAATTAV		 SELEX
Yin et al.(2017)
EMX1_FL_HT-SELEX 		0.599 0.474
EMX2
M05281_2.00 		Homo sapiens
YTAATKAB
VTMATTAR		 SELEX
Yin et al.(2017)
EMX2_eDBD_HT-SELEX 		0.599 0.474
EMX1
M05146_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
EMX1_eDBD_Methyl-HT-SELEX 		0.599 0.474
EMX1
M05148_2.00 		Homo sapiens
BTAATTAN
NTAATTAV		 SELEX
Yin et al.(2017)
EMX1_FL_Methyl-HT-SELEX 		0.599 0.474
EMX2
M05282_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Yin et al.(2017)
EMX2_eDBD_Methyl-HT-SELEX 		0.599 0.474
O76842_CUPSA
M02199_2.00 		Cupiennius salei
TTAATTAB
VTAATTAA		 PBM
Weirauch et al.(2014)
pTH6251 		0.599 0.526
lab
M03797_2.00 		Drosophila melanogaster
NTAATTAS
STAATTAN		 SELEX
Nitta et al.(2015)
lab_1 		0.599 0.526
HOXB1
M05057_2.00 		Homo sapiens
NTAATTAS
STAATTAN		 SELEX
Yin et al.(2017)
HOXB1_eDBD_HT-SELEX 		0.599 0.526
lab
M06493_2.00 		Drosophila melanogaster
TTAATKA
TMATTAA		 B1H
Mathelier et al.(2014)
MA0230.1 		0.599 0.526
lab
M06260_2.00 		Drosophila melanogaster
TTAATKA
TMATTAA		 B1H
Zhu et al.(2011)
Lab_Cell_FBgn0002522 		0.599 0.526
lab
M06261_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Zhu et al.(2011)
Lab_SOLEXA_FBgn0002522 		0.599 0.526
HOXB1
M05058_2.00 		Homo sapiens
GTAATBAN
NTVATTAC		 SELEX
Yin et al.(2017)
HOXB1_eDBD_Methyl-HT-SELEX_1 		0.599 0.526
HOXB1
M05059_2.00 		Homo sapiens
NTRAYGMB
VKCRTYAN		 SELEX
Yin et al.(2017)
HOXB1_eDBD_Methyl-HT-SELEX_2 		0.599 0.526
Hoxa1
M00450_2.00 		Mus musculus
NHRATKRNN
NNYMATYDN		 PBM
Berger et al.(2008)
Hoxa1_3425 		0.599 0.509
HOXA1
M03096_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
HOXA1_1 		0.599 0.509
HOXA1
M04959_2.00 		Homo sapiens
NTMATKAN
NTMATKAN		 SELEX
Yin et al.(2017)
HOXA1_FL_HT-SELEX 		0.599 0.509
HOXA1
M09133_2.00 		Homo sapiens
NKGATGGATG
CATCCATCMN		 Misc
Kulakovskiy et al.(2013)
HXA1_HUMAN.H11MO.0.C 		0.599 0.509
Hoxa1
M09196_2.00 		Mus musculus
NKGATGGATG
CATCCATCMN		 Misc
Kulakovskiy et al.(2013)
HXA1_MOUSE.H11MO.0.C 		0.599 0.509
HOXA1
M04960_2.00 		Homo sapiens
NTMATKAN
NTMATKAN		 SELEX
Yin et al.(2017)
HOXA1_FL_Methyl-HT-SELEX_1 		0.599 0.509
HOXA1
M04961_2.00 		Homo sapiens
NTAAYGAB
VTCRTTAN		 SELEX
Yin et al.(2017)
HOXA1_FL_Methyl-HT-SELEX_2 		0.599 0.509
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Smp_029620.1:pep Homeodomain 53 109

Links

Other Homeodomain family TFs
Other Schistosoma mansoni TFs

3191 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00051p00204250 Amborella trichopoda AMTR_s00051p00204250 I
Aquca_007_00717 Aquilegia coerulea Aquca_007_00717 I
Aquca_010_00625 Aquilegia coerulea Aquca_010_00625 I
DEAR3 Arabidopsis lyrata fgenesh2_kg.4__264__AT2G23340.1 I
CEJ1 Arabidopsis lyrata fgenesh2_kg.5__1372__AT3G50260.1 I
RAP2.9 Arabidopsis lyrata fgenesh2_kg.6__2823__AT4G06746.1 I
RAP2.1 Arabidopsis lyrata scaffold_104275.1 I
RAP2.10 Arabidopsis lyrata scaffold_700370.1 I
DEAR2 Arabidopsis lyrata scaffold_803390.1 I
RAP2-1 Arabidopsis thaliana AT1G46768 D
ERF011 Arabidopsis thaliana AT3G50260 D
RAP2-9 Arabidopsis thaliana AT4G06746 D
RAP2-10 Arabidopsis thaliana AT4G36900 D
ERF010 Arabidopsis thaliana AT5G67190 D
Bostr.0568s0141 Boechera stricta Bostr.0568s0141 I
Bostr.12302s0138 Boechera stricta Bostr.12302s0138 I
Bostr.27895s0153 Boechera stricta Bostr.27895s0153 I
Bostr.3877s0058 Boechera stricta Bostr.3877s0058 I
Bostr.6864s0220 Boechera stricta Bostr.6864s0220 I
Bostr.7867s1581 Boechera stricta Bostr.7867s1581 I
BRADI1G48320 Brachypodium distachyon BRADI1G48320 I
BRADI5G24110 Brachypodium distachyon BRADI5G24110 I
Bo1g004940 Brassica oleracea Bo1g004940 I
Bo4g151460 Brassica oleracea Bo4g151460 I
Bo7g063980 Brassica oleracea Bo7g063980 I
Bo7g118430 Brassica oleracea Bo7g118430 I
Bo8g079660 Brassica oleracea Bo8g079660 I
Bo9g020380 Brassica oleracea Bo9g020380 I
Bra011744 Brassica rapa Bra011744 I
Bra012140 Brassica rapa Bra012140 I
Bra014056 Brassica rapa Bra014056 I
Bra017811 Brassica rapa Bra017811 I
Bra032173 Brassica rapa Bra032173 I
Bra036061 Brassica rapa Bra036061 I
Bra037124 Brassica rapa Bra037124 I
PK15612.1 Cannabis sativa PK15612.1 I
Cagra.0342s0005 Capsella grandiflora Cagra.0342s0005 I
Cagra.0706s0004 Capsella grandiflora Cagra.0706s0004 I
Cagra.1735s0005 Capsella grandiflora Cagra.1735s0005 I
Cagra.29993s0001 Capsella grandiflora Cagra.29993s0001 I
Cagra.4909s0050 Capsella grandiflora Cagra.4909s0050 I
Carubv10005767m.g Capsella rubella Carubv10005767m.g I
Carubv10010891m.g Capsella rubella Carubv10010891m.g I
Carubv10018162m.g Capsella rubella Carubv10018162m.g I
Carubv10024198m.g Capsella rubella Carubv10024198m.g I
Carubv10027999m.g Capsella rubella Carubv10027999m.g I
Ca_01556 Cicer arietinum Ca_01556 I
Ca_02170 Cicer arietinum Ca_02170 I
Cla014175 Citrullus lanatus Cla014175 I
Cla020550 Citrullus lanatus Cla020550 I
Cla020961 Citrullus lanatus Cla020961 I
Cla022937 Citrullus lanatus Cla022937 I
Ciclev10002733m.g Citrus clementina Ciclev10002733m.g I
Ciclev10026687m.g Citrus clementina Ciclev10026687m.g I
orange1.1g031669m.g Citrus sinensis orange1.1g031669m.g I
orange1.1g041516m.g Citrus sinensis orange1.1g041516m.g I
Cucsa.102560 Cucumis sativus Cucsa.102560 I
Cucsa.352470 Cucumis sativus Cucsa.352470 I
Cucsa.367300 Cucumis sativus Cucsa.367300 I
Cucsa.395960 Cucumis sativus Cucsa.395960 I
Eucgr.F00192 Eucalyptus grandis Eucgr.F00192 I
Eucgr.F02317 Eucalyptus grandis Eucgr.F02317 I
Eucgr.F02319 Eucalyptus grandis Eucgr.F02319 I
Eucgr.H02094 Eucalyptus grandis Eucgr.H02094 I
Thhalv10000354m.g Eutrema salsugineum Thhalv10000354m.g I
Thhalv10004985m.g Eutrema salsugineum Thhalv10004985m.g I
Thhalv10026288m.g Eutrema salsugineum Thhalv10026288m.g I
Thhalv10029052m.g Eutrema salsugineum Thhalv10029052m.g I
gene09137-v1.0-hybrid Fragaria vesca gene09137-v1.0-hybrid I
gene23873-v1.0-hybrid Fragaria vesca gene23873-v1.0-hybrid I
GLYMA01G39540 Glycine max GLYMA01G39540 I
GLYMA04G04355 Glycine max GLYMA04G04355 I
GLYMA05G19050 Glycine max GLYMA05G19050 I
GLYMA06G04490 Glycine max GLYMA06G04490 I
GLYMA11G05700 Glycine max GLYMA11G05700 I
GLYMA14G09320 Glycine max GLYMA14G09320 I
GLYMA17G18580 Glycine max GLYMA17G18580 I
GLYMA17G35860 Glycine max GLYMA17G35860 I
Gorai.003G026100 Gossypium raimondii Gorai.003G026100 I
Gorai.003G099700 Gossypium raimondii Gorai.003G099700 I
Gorai.008G077900 Gossypium raimondii Gorai.008G077900 I
Gorai.009G214300 Gossypium raimondii Gorai.009G214300 I
Gorai.010G021900 Gossypium raimondii Gorai.010G021900 I
MLOC_81350 Hordeum vulgare MLOC_81350 I
LPERR04G23120 Leersia perrieri LPERR04G23120 I
LPERR06G04000 Leersia perrieri LPERR06G04000 I
Lus10009373.g Linum usitatissimum Lus10009373.g I
Lus10010043.g Linum usitatissimum Lus10010043.g I
Lus10018727.g Linum usitatissimum Lus10018727.g I
LjSGA_004289.2 Lotus japonicus LjSGA_004289.2 I
LjSGA_007705.1 Lotus japonicus LjSGA_007705.1 I
LjSGA_134387.1 Lotus japonicus LjSGA_134387.1 I
MDP0000125673 Malus domestica MDP0000125673 I
MDP0000179962 Malus domestica MDP0000179962 I
MDP0000756341 Malus domestica MDP0000756341 I
cassava17493.valid.m1 Manihot esculenta cassava17493.valid.m1 I
cassava47353.m1 Manihot esculenta cassava47353.m1 I
cassava9153.m1 Manihot esculenta cassava9153.m1 I
MTR_1g019110 Medicago truncatula MTR_1g019110 I
MTR_3g102100 Medicago truncatula MTR_3g102100 I
MTR_5g016750 Medicago truncatula MTR_5g016750 I
mgf000289m Mimulus guttatus mgf000289m I
mgf006561m Mimulus guttatus mgf006561m I
mgf021115m Mimulus guttatus mgf021115m I
mgf025363m Mimulus guttatus mgf025363m I
GSMUA_Achr3G13190_001 Musa acuminata GSMUA_Achr3G13190_001 I
GSMUA_Achr4G20280_001 Musa acuminata GSMUA_Achr4G20280_001 I
GSMUA_Achr5G22190_001 Musa acuminata GSMUA_Achr5G22190_001 I
GSMUA_Achr7G05410_001 Musa acuminata GSMUA_Achr7G05410_001 I
GSMUA_Achr7G20800_001 Musa acuminata GSMUA_Achr7G20800_001 I
GSMUA_Achr8G15640_001 Musa acuminata GSMUA_Achr8G15640_001 I
GSMUA_Achr9G11310_001 Musa acuminata GSMUA_Achr9G11310_001 I
GSMUA_AchrUn_randomG12040_001 Musa acuminata GSMUA_AchrUn_randomG12040_001 I
GSMUA_AchrUn_randomG26940_001 Musa acuminata GSMUA_AchrUn_randomG26940_001 I
OBART06G04460 Oryza barthii OBART06G04460 I
ORGLA04G0237600 Oryza glaberrima ORGLA04G0237600 I
ORGLA06G0041000 Oryza glaberrima ORGLA06G0041000 I
OGLUM04G27370 Oryza glumaepatula OGLUM04G27370 I
OGLUM06G04560 Oryza glumaepatula OGLUM06G04560 I
BGIOSGA014220 Oryza indica BGIOSGA014220 I
BGIOSGA014221 Oryza indica BGIOSGA014221 I
BGIOSGA022380 Oryza indica BGIOSGA022380 I
OMERI04G22870 Oryza meridionalis OMERI04G22870 I
ONIVA04G25910 Oryza nivara ONIVA04G25910 I
ONIVA06G05630 Oryza nivara ONIVA06G05630 I
OPUNC06G04240 Oryza punctata OPUNC06G04240 I
ORUFI06G04420 Oryza rufipogon ORUFI06G04420 I
OS04G0648900 Oryza sativa OS04G0648900 I
OS06G0166400 Oryza sativa OS06G0166400 I
Pavir.J04844 Panicum virgatum Pavir.J04844 I
Pavir.J20437 Panicum virgatum Pavir.J20437 I
Pavir.J27349 Panicum virgatum Pavir.J27349 I
Pavir.J34361 Panicum virgatum Pavir.J34361 I
POPTR_0002s12550 Populus trichocarpa POPTR_0002s12550 I
POPTR_0005s18430 Populus trichocarpa POPTR_0005s18430 I
POPTR_0007s10750 Populus trichocarpa POPTR_0007s10750 I
POPTR_0014s02530 Populus trichocarpa POPTR_0014s02530 I
PRUPE_ppa012302mg Prunus persica PRUPE_ppa012302mg I
PRUPE_ppa012516mg Prunus persica PRUPE_ppa012516mg I
28718.m000038 Ricinus communis 28718.m000038 I
30170.m013843 Ricinus communis 30170.m013843 I
SapurV1A.0167s0190 Salix purpurea SapurV1A.0167s0190 I
SapurV1A.0423s0180 Salix purpurea SapurV1A.0423s0180 I
SapurV1A.0689s0100 Salix purpurea SapurV1A.0689s0100 I
SapurV1A.1340s0030 Salix purpurea SapurV1A.1340s0030 I
SapurV1A.1616s0040 Salix purpurea SapurV1A.1616s0040 I
SapurV1A.2355s0030 Salix purpurea SapurV1A.2355s0030 I
Solyc04g078640.1 Solanum lycopersicum Solyc04g078640.1 I
PGSC0003DMG400004005 Solanum tuberosum PGSC0003DMG400004005 I
PGSC0003DMG400007951 Solanum tuberosum PGSC0003DMG400007951 I
PGSC0003DMG400034101 Solanum tuberosum PGSC0003DMG400034101 I
Sb06g030660 Sorghum bicolor Sb06g030660 I
Sb10g004580 Sorghum bicolor Sb10g004580 I
TCM_000669 Theobroma cacao TCM_000669 I
TCM_033791 Theobroma cacao TCM_033791 I
Traes_2BL_1E57B73B21 Triticum aestivum Traes_2BL_1E57B73B21 I
VIT_07s0031g00190 Vitis vinifera VIT_07s0031g00190 I
VIT_18s0001g10150 Vitis vinifera VIT_18s0001g10150 I
GRMZM2G119865 Zea mays GRMZM2G119865 I
GRMZM2G174917 Zea mays GRMZM2G174917 I
GRMZM2G301860 Zea mays GRMZM2G301860 I
GRMZM2G421033 Zea mays GRMZM2G421033 I