cassava31027.valid.m1 (Manihot esculenta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 cassava31027.valid.m1 T227098_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava31027.valid.m1 Homeodomain 21 65

Links

Other Homeodomain family TFs
Other Manihot esculenta TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_603934.1 Arabidopsis lyrata scaffold_603934.1 N 0.816
Bo9g006410 Brassica oleracea Bo9g006410 N 0.811
BTMF_0000474601 Brugia timori BTMF_0000474601 N 0.610
CABZ01080370.1 Danio rerio ENSDARG00000102550 N 0.599
ENSDNOG00000038094 Dasypus novemcinctus ENSDNOG00000038094 N 0.627
DICVIV_12877 Dictyocaulus viviparus DICVIV_12877 N 0.600
D915_07707 Fasciola hepatica D915_07707 N 0.629
gene14635-v1.0-hybrid Fragaria vesca gene14635-v1.0-hybrid N 0.793
GLYMA08G38930 Glycine max GLYMA08G38930 N 0.811
Gorai.013G254100 Gossypium raimondii Gorai.013G254100 I 0.831
Gorai.004G014700 Gossypium raimondii Gorai.004G014700 I 0.803
LjSGA_012738.1 Lotus japonicus LjSGA_012738.1 N 0.817
GSMUA_Achr8G27210_001 Musa acuminata GSMUA_Achr8G27210_001 N 0.652
GSMUA_Achr9G06610_001 Musa acuminata GSMUA_Achr9G06610_001 N 0.652
OESDEN_18963 Oesophagostomum dentatum OESDEN_18963 N 0.600
OBART05G11630 Oryza barthii OBART05G11630 N 0.670
OBART01G26120 Oryza barthii OBART01G26120 N 0.658
OB01G35260 Oryza brachyantha OB01G35260 N 0.658
BGIOSGA019617 Oryza indica BGIOSGA019617 N 0.657
OLONG_014924 Oryza longistaminata OLONG_014924 N 0.658
ONIVA05G12010 Oryza nivara ONIVA05G12010 N 0.657
ORUFI05G12600 Oryza rufipogon ORUFI05G12600 N 0.705
POPTR_0004s04840 Populus trichocarpa POPTR_0004s04840 N 0.652
Pm012761 Prunus mume Pm012761 N 0.823
SapurV1A.0042s0570 Salix purpurea SapurV1A.0042s0570 I 0.831
PGSC0003DMG400004714 Solanum tuberosum PGSC0003DMG400004714 I 0.790
TCM_008214 Theobroma cacao TCM_008214 I 0.738