nDi.2.2.2.g11207 (Dirofilaria immitis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 nDi.2.2.2.g11207 T235324_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.733 0.400
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.733 0.400
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.733 0.400
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.733 0.400
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.733 0.400
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.733 0.400
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.733 0.400
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.733 0.400
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.733 0.400
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.680 0.244
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.680 0.244
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.680 0.244
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nDi.2.2.2.t11207 Homeodomain 38 82

Links

Other Homeodomain family TFs
Other Dirofilaria immitis TFs

1226 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_20121 Aegilops tauschii F775_20121 N
Aquca_014_00165 Aquilegia coerulea Aquca_014_00165 N
BRADI3G57700 Brachypodium distachyon BRADI3G57700 N
PK16821.1 Cannabis sativa PK16821.1 N
PK04394.1 Cannabis sativa PK04394.1 N
evm.TU.supercontig_49.133 Carica papaya evm.TU.supercontig_49.133 N
evm.TU.supercontig_49.134 Carica papaya evm.TU.supercontig_49.134 N
Cla002005 Citrullus lanatus Cla002005 N
Ciclev10001827m.g Citrus clementina Ciclev10001827m.g N
Ciclev10001601m.g Citrus clementina Ciclev10001601m.g N
orange1.1g020440m.g Citrus sinensis orange1.1g020440m.g N
orange1.1g017878m.g Citrus sinensis orange1.1g017878m.g N
Cucsa.239250 Cucumis sativus Cucsa.239250 N
Thhalv10028879m.g Eutrema salsugineum Thhalv10028879m.g N
gene11787-v1.0-hybrid Fragaria vesca gene11787-v1.0-hybrid N
Gorai.005G260200 Gossypium raimondii Gorai.005G260200 N
MLOC_54605 Hordeum vulgare MLOC_54605 N
LPERR02G27910 Leersia perrieri LPERR02G27910 N
MDP0000634922 Malus domestica MDP0000634922 N
MDP0000597087 Malus domestica MDP0000597087 N
cassava19406.valid.m1 Manihot esculenta cassava19406.valid.m1 N
mgf000387m Mimulus guttatus mgf000387m N
mgf013454m Mimulus guttatus mgf013454m N
GSMUA_Achr2G01240_001 Musa acuminata GSMUA_Achr2G01240_001 N
GSMUA_Achr8G18160_001 Musa acuminata GSMUA_Achr8G18160_001 N
OBART02G34050 Oryza barthii OBART02G34050 N
OB02G40920 Oryza brachyantha OB02G40920 N
OB07G29110 Oryza brachyantha OB07G29110 N
ORGLA02G0294700 Oryza glaberrima ORGLA02G0294700 N
OGLUM02G35200 Oryza glumaepatula OGLUM02G35200 I
BGIOSGA009119 Oryza indica BGIOSGA009119 N
OLONG_015646 Oryza longistaminata OLONG_015646 N
OMERI02G32400 Oryza meridionalis OMERI02G32400 I
ONIVA02G36110 Oryza nivara ONIVA02G36110 I
ORUFI02G35580 Oryza rufipogon ORUFI02G35580 I
OS02G0770600 Oryza sativa OS02G0770600 N
Pavir.Aa00349 Panicum virgatum Pavir.Aa00349 N
Pavir.J01310 Panicum virgatum Pavir.J01310 N
POPTR_0001s21610 Populus trichocarpa POPTR_0001s21610 N
POPTR_0003s01620 Populus trichocarpa POPTR_0003s01620 N
PRUPE_ppa007591mg Prunus persica PRUPE_ppa007591mg N
30116.m000393 Ricinus communis 30116.m000393 N
SapurV1A.0647s0030 Salix purpurea SapurV1A.0647s0030 N
SapurV1A.0869s0080 Salix purpurea SapurV1A.0869s0080 N
Si017699m.g Setaria italica Si017699m.g N
PGSC0003DMG400023744 Solanum tuberosum PGSC0003DMG400023744 N
PGSC0003DMG400026151 Solanum tuberosum PGSC0003DMG400026151 N
TCM_006422 Theobroma cacao TCM_006422 N
Traes_6DL_647FC758E1 Triticum aestivum Traes_6DL_647FC758E1 N
TRIUR3_20834 Triticum urartu TRIUR3_20834 N
VIT_18s0001g03950 Vitis vinifera VIT_18s0001g03950 N
VIT_12s0034g00960 Vitis vinifera VIT_12s0034g00960 N