Si017699m.g (Setaria italica)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Si017699m.g T332545_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Si017699m Sox 164 208

Links

Other Sox family TFs
Other Setaria italica TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA009119 Oryza indica BGIOSGA009119 N 0.741
LPERR02G27910 Leersia perrieri LPERR02G27910 N 0.741
OB07G29110 Oryza brachyantha OB07G29110 N 0.741
OBART02G34050 Oryza barthii OBART02G34050 N 0.741
OLONG_015646 Oryza longistaminata OLONG_015646 N 0.741
OPUNC02G31450 Oryza punctata OPUNC02G31450 N 0.741
ORGLA02G0294700 Oryza glaberrima ORGLA02G0294700 N 0.741
OS02G0770600 Oryza sativa OS02G0770600 N 0.741
Pavir.Aa00349 Panicum virgatum Pavir.Aa00349 N 0.741
Pavir.J01310 Panicum virgatum Pavir.J01310 N 0.741
OMERI02G32400 Oryza meridionalis OMERI02G32400 I 0.741
ONIVA02G36110 Oryza nivara ONIVA02G36110 I 0.741
OGLUM02G35200 Oryza glumaepatula OGLUM02G35200 I 0.741
ORUFI02G35580 Oryza rufipogon ORUFI02G35580 I 0.741
OB02G40920 Oryza brachyantha OB02G40920 N 0.735
mgf000387m Mimulus guttatus mgf000387m N 0.697
mgf013454m Mimulus guttatus mgf013454m N 0.697
POPTR_0003s01620 Populus trichocarpa POPTR_0003s01620 N 0.683
Ciclev10001601m.g Citrus clementina Ciclev10001601m.g N 0.679
orange1.1g017878m.g Citrus sinensis orange1.1g017878m.g N 0.679
SapurV1A.0647s0030 Salix purpurea SapurV1A.0647s0030 N 0.679
BRADI3G57700 Brachypodium distachyon BRADI3G57700 N 0.667
F775_20121 Aegilops tauschii F775_20121 N 0.663
MLOC_54605 Hordeum vulgare MLOC_54605 N 0.663
Traes_6DL_647FC758E1 Triticum aestivum Traes_6DL_647FC758E1 N 0.663
TRIUR3_20834 Triticum urartu TRIUR3_20834 N 0.663
30116.m000393 Ricinus communis 30116.m000393 N 0.653
Aquca_014_00165 Aquilegia coerulea Aquca_014_00165 N 0.651
Ciclev10001827m.g Citrus clementina Ciclev10001827m.g N 0.650
orange1.1g020440m.g Citrus sinensis orange1.1g020440m.g N 0.650
PGSC0003DMG400023744 Solanum tuberosum PGSC0003DMG400023744 N 0.646
Gorai.005G260200 Gossypium raimondii Gorai.005G260200 N 0.635
GSMUA_Achr2G01240_001 Musa acuminata GSMUA_Achr2G01240_001 N 0.634
gene11787-v1.0-hybrid Fragaria vesca gene11787-v1.0-hybrid N 0.623
POPTR_0001s21610 Populus trichocarpa POPTR_0001s21610 N 0.622
SapurV1A.0869s0080 Salix purpurea SapurV1A.0869s0080 N 0.622
PGSC0003DMG400026151 Solanum tuberosum PGSC0003DMG400026151 N 0.621
PRUPE_ppa007591mg Prunus persica PRUPE_ppa007591mg N 0.610
Cla002005 Citrullus lanatus Cla002005 N 0.604
Cucsa.239250 Cucumis sativus Cucsa.239250 N 0.604
PK04394.1 Cannabis sativa PK04394.1 N 0.604
evm.TU.supercontig_49.134 Carica papaya evm.TU.supercontig_49.134 N 0.598
PK16821.1 Cannabis sativa PK16821.1 N 0.598
VIT_12s0034g00960 Vitis vinifera VIT_12s0034g00960 N 0.591
VIT_18s0001g03950 Vitis vinifera VIT_18s0001g03950 N 0.586
MDP0000597087 Malus domestica MDP0000597087 N 0.583
TCM_006422 Theobroma cacao TCM_006422 N 0.576
cassava19406.valid.m1 Manihot esculenta cassava19406.valid.m1 N 0.563
GSMUA_Achr8G18160_001 Musa acuminata GSMUA_Achr8G18160_001 N 0.543
MDP0000634922 Malus domestica MDP0000634922 N 0.543
evm.TU.supercontig_49.133 Carica papaya evm.TU.supercontig_49.133 N 0.542
Thhalv10028879m.g Eutrema salsugineum Thhalv10028879m.g N 0.528